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SCNpilot_solid_1_scaffold_139

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Displaying items 1-30 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_139_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..127
DNA (126bp) protein (42aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1X2X7_VARPD
putative acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADU34352.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
SCNpilot_solid_1_scaffold_139_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133..552
DNA (420bp) protein (140aa)
Putative 4-hydroxybenzoyl CoA thioesterase (EC:3.1.2.23)
Putative 4-hydroxybenzoyl CoA thioesterase {ECO:0000313|EMBL:CDM25521.1}; EC=3.1.2.23 {ECO:0000313|EMBL:CDM25521.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Putative 4-hydroxybenzoyl-CoA thioesterase protein n=2 Tax=Ralstonia pickettii RepID=B2UHA0_RALPJ
SCNpilot_solid_1_scaffold_139_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

574..1506
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8K0_VARPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34983.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_solid_1_scaffold_139_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1516..2310)
DNA (795bp) protein (265aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S8_ALIDB
ABC transporter
ATP-binding protein {ECO:0000313|EMBL:GAO23233.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1
SCNpilot_solid_1_scaffold_139_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2327..3235)
DNA (909bp) protein (303aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7A3_ACISJ rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACM33206.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
SCNpilot_solid_1_scaffold_139_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3325..4290)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7A4_ACISJ rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJA09131.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
hypothetical protein
SCNpilot_solid_1_scaffold_139_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4446..6140)
DNA (1695bp) protein (565aa)
dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI00023758E2 rbh
electron-transferring-flavoprotein dehydrogenase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
electron-transferring-flavoprotein dehydrogenase
SCNpilot_solid_1_scaffold_139_trna_7
unknown

Not on your lists

comp(6259..6338)
DNA (80bp)
transferRNA
SCNpilot_solid_1_scaffold_139_trna_6
unknown

Not on your lists

comp(6385..6457)
DNA (73bp)
transferRNA
SCNpilot_solid_1_scaffold_139_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6515..6943)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000362CE1F
Uncharacterized protein {ECO:0000313|EMBL:GAD22162.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_139_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6949..7503
DNA (555bp) protein (185aa)
peptide deformylase n=1 Tax=Acidovorax radicis RepID=UPI000237517E
peptide deformylase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
peptide deformylase
SCNpilot_solid_1_scaffold_139_10
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7455..7826)
DNA (372bp) protein (124aa)
Thioredoxin domain-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q0R0_ACIAP
thioredoxin domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_139_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7828..9162)
DNA (1335bp) protein (445aa)
molybdenum cofactor biosynthesis protein MoaA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035DC3CE rbh
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:GAD23992.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
molybdenum cofactor synthesis domain-containing protein
SCNpilot_solid_1_scaffold_139_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9159..9776)
DNA (618bp) protein (206aa)
Molybdenum cofactor guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000255|HAMAP-Rule:MF_00316};; GTP:molybd
Molybdenum cofactor guanylyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=MOBA_ACIET
mobA; molybdopterin-guanine dinucleotide biosynthesis protein moba
SCNpilot_solid_1_scaffold_139_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9783..10961)
DNA (1179bp) protein (393aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364BF6C rbh
molybdenum cofactor biosynthesis protein A
SCNpilot_solid_1_scaffold_139_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11135..12040
DNA (906bp) protein (302aa)
hypothetical protein id=12557254 bin=CNBR_ACIDO species=Limnohabitans sp. Rim47 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
SCNpilot_solid_1_scaffold_139_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12012..14450)
DNA (2439bp) protein (813aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; DNA-binding ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IAB0_9BRAD
SCNpilot_solid_1_scaffold_139_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14447..14845)
DNA (399bp) protein (133aa)
Molecular chaperone (Small heat shock protein)-like protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMF3_METSB
Precorrin-6X reductase {ECO:0000313|EMBL:KFC68471.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
molecular chaperone (small heat shock protein)-like protein
SCNpilot_solid_1_scaffold_139_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14907..15407)
DNA (501bp) protein (167aa)
Activator of Hsp90 ATPase 1 family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTY6_ALIDB
activator of hsp90 atpase 1 family protein
ATPase 1 family protein {ECO:0000313|EMBL:GAO25987.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_solid_1_scaffold_139_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15591..16088)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F622E
Appr-1-p processing domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
SCNpilot_solid_1_scaffold_139_19
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16126..19446)
DNA (3321bp) protein (1107aa)
Type I restriction-modification system restriction subunit n=1 Tax=Pseudomonas poae RE*1-1-14 RepID=M4KC30_9PSED rbh
type I restriction-modification system restriction subunit Tax=GWA2_Gallionellales_60_18_curated
type I restriction-modification system restriction subunit
SCNpilot_solid_1_scaffold_139_20
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19489..20562)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHN6_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44328.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_solid_1_scaffold_139_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20576..20785)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:ABX35074.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
SCNpilot_solid_1_scaffold_139_22
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20873..21295)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IWA4_9BURK
Zeta toxin family protein {ECO:0000313|EMBL:ERI34629.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EG
hypothetical protein
SCNpilot_solid_1_scaffold_139_23
Pseudomonas poae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21292..22527)
DNA (1236bp) protein (412aa)
Restriction modification system DNA specificity subunit n=1 Tax=Pseudomonas poae RE*1-1-14 RepID=M4K5K2_9PSED
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity subunit {ECO:0000313|EMBL:AGE28274.1}; TaxID=1282356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
SCNpilot_solid_1_scaffold_139_24
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22524..23567)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00035C4777 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGV33946.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodoco
hypothetical protein
SCNpilot_solid_1_scaffold_139_25
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23564..25723)
DNA (2160bp) protein (720aa)
hsdM2; type I restriction-modification system DNA methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system DNA methyltransferase subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHN4_9GAMM rbh
type I restriction-modification system DNA methyltransferase subunit Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCNpilot_solid_1_scaffold_139_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25995..26378)
DNA (384bp) protein (128aa)
ABC drug efflux pump, inner membrane subunit, DrrB family id=4035240 bin=GWC2_Methylomirabilis_70_16 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multidrug ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_solid_1_scaffold_139_27
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26487..27866
DNA (1380bp) protein (460aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNT3_ACIAC rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM32621.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
SCNpilot_solid_1_scaffold_139_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28021..31179
DNA (3159bp) protein (1053aa)
acriflavin resistance protein n=1 Tax=Variovorax paradoxus RepID=UPI0003694BA5 rbh
Multidrug resistance protein MdtB {ECO:0000313|EMBL:AGU50812.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
mdtB; multidrug resistance protein MdtB
Displaying items 1-30 of 256 in total

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