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SCNpilot_solid_1_scaffold_139

Search features with annotation key words

Displaying items 121-150 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_139_118
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128545..129825)
DNA (1281bp) protein (427aa)
o-acetylhomoserine/o-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ACM33047.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ACM33047.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN1_ACIET rbh
SCNpilot_solid_1_scaffold_139_119
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129953..130192
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN4_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33050.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_139_120
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130254..131402
DNA (1149bp) protein (383aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
CMP/dCMP deaminase zinc-binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN5_ACIET rbh
zinc-binding CMP/dCMP deaminase
SCNpilot_solid_1_scaffold_139_121
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131408..132376
DNA (969bp) protein (323aa)
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:ACM33052.1}; EC=3.4.17.13 {ECO:0000313|EMBL:ACM33052.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN6_ACIET rbh
SCNpilot_solid_1_scaffold_139_122
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132471..133391
DNA (921bp) protein (307aa)
Forkhead-associated protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSJ8_ALIDB rbh
forkhead-associated protein
Adenylate/guanylate cyclase {ECO:0000313|EMBL:AEB85266.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_solid_1_scaffold_139_123
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133410..134288)
DNA (879bp) protein (293aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037478B6 rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
cobyrinic acid ac-diamide synthase
SCNpilot_solid_1_scaffold_139_124
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134272..135018)
DNA (747bp) protein (249aa)
diguanylate cyclase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003713965 rbh
FOG: GGDEF domain {ECO:0000313|EMBL:GAD21436.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
SCNpilot_solid_1_scaffold_139_125
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135112..136791)
DNA (1680bp) protein (560aa)
sulfate transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037979C2 rbh
Sulphate transporter {ECO:0000313|EMBL:GAD23534.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sulfate transporter
SCNpilot_solid_1_scaffold_139_126
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136823..138043
DNA (1221bp) protein (407aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRR5_ALIDB rbh
cys/met metabolism pyridoxal-phosphate-dependent protein
Cystathionine beta-lyase {ECO:0000313|EMBL:GAO23007.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus s
SCNpilot_solid_1_scaffold_139_127
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138087..138764)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F3F74
Arylesterase {ECO:0000313|EMBL:KJA12197.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
arylesterase
SCNpilot_solid_1_scaffold_139_128
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138784..139446
DNA (663bp) protein (221aa)
Abc transporter related protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KU00_9BURK
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=GWA2_Curvibacter_64_110_curated
predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
SCNpilot_solid_1_scaffold_139_129
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139437..140870)
DNA (1434bp) protein (478aa)
cardiolipin synthetase 2 (EC:2.7.8.-)
Cardiolipin synthetase 2 {ECO:0000313|EMBL:ABM43675.1}; EC=2.7.8.- {ECO:0000313|EMBL:ABM43675.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Cardiolipin synthetase 2 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBQ0_ACISJ
SCNpilot_solid_1_scaffold_139_130
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140898..141689
DNA (792bp) protein (264aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] id=5083701 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase
SCNpilot_solid_1_scaffold_139_131
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141802..143724
DNA (1923bp) protein (641aa)
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7E0_ACIDE rbh
Adenylate/guanylate cyclase with Chase sensor {ECO:0000313|EMBL:EER59615.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
adenylate/guanylate cyclase with Chase sensor
SCNpilot_solid_1_scaffold_139_132
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143721..144233
DNA (513bp) protein (171aa)
SH3 type 3 domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7D9_ACIDE
SH3 type 3 domain protein {ECO:0000313|EMBL:EER59614.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
SH3 type 3 domain protein
SCNpilot_solid_1_scaffold_139_133
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144230..145144
DNA (915bp) protein (305aa)
Peptidase M48 Ste24p n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7D8_ACIDE rbh
Peptidase M48 Ste24p {ECO:0000313|EMBL:EER59613.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
peptidase M48 Ste24p
SCNpilot_solid_1_scaffold_139_134
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145141..145479
DNA (339bp) protein (113aa)
Small multidrug resistance protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIR0_ACIET
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ACM33076.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_solid_1_scaffold_139_135
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145508..145873)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037A65F6
Predicted transcriptional regulator {ECO:0000313|EMBL:GAD21460.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
ArsR family transcriptional regulator
SCNpilot_solid_1_scaffold_139_136
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145885..148788)
DNA (2904bp) protein (968aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003781BC3
Uncharacterized protein {ECO:0000313|EMBL:GAD63789.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
diguanylate cyclase/phosphodiesterase
SCNpilot_solid_1_scaffold_139_137
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148952..149689)
DNA (738bp) protein (246aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRU9_ALIDB rbh
tRNA (guanine-n(7)-)-methyltransferase
SCNpilot_solid_1_scaffold_139_138
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149659..150603)
DNA (945bp) protein (315aa)
glutamate--tRNA ligase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7D3_ACISJ rbh
SCNpilot_solid_1_scaffold_139_139
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150708..151757)
DNA (1050bp) protein (350aa)
UPI0003D3E2F5 related cluster n=1 Tax=unknown RepID=UPI0003D3E2F5 rbh
Predicted NAD/FAD-dependent oxidoreductase {ECO:0000313|EMBL:GAD20409.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
FAD dependent oxidoreductase
SCNpilot_solid_1_scaffold_139_140
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151804..152742)
DNA (939bp) protein (313aa)
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRU6_ALIDB rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB85242.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
SCNpilot_solid_1_scaffold_139_141
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152855..153556
DNA (702bp) protein (234aa)
Pirin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRU5_ALIDB rbh
pirin
Pirin domain protein {ECO:0000313|EMBL:ADV00309.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitr
SCNpilot_solid_1_scaffold_139_142
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153602..154528
DNA (927bp) protein (309aa)
aspartyl/asparaginyl beta-hydroxylase AspH n=1 Tax=Comamonas sp. B-9 RepID=UPI000395585E rbh
aspartyl/asparaginyl beta-hydroxylase AspH
Aspartyl/asparaginyl beta-hydroxylase AspH {ECO:0000313|EMBL:AIJ49451.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Com
SCNpilot_solid_1_scaffold_139_143
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154599..155327)
DNA (729bp) protein (243aa)
arginyl-tRNA-protein transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363F5E8 rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
arginyl-tRNA--protein transferase
SCNpilot_solid_1_scaffold_139_144
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155311..155937)
DNA (627bp) protein (209aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJA7_ACIET
SCNpilot_solid_1_scaffold_139_145
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155950..156333)
DNA (384bp) protein (128aa)
lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=397945 species="Bacteria; Proteobacteria; Bet
glyoxalase I n=1 Tax=Acidovorax avenae RepID=UPI000315C230
SCNpilot_solid_1_scaffold_139_146
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156366..157355
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034AD574
group 1 glycosyl transferase Tax=GWA2_Curvibacter_64_110_curated
group 1 glycosyl transferase
SCNpilot_solid_1_scaffold_139_147
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157401..158468
DNA (1068bp) protein (356aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYI5_VARPE rbh
selenide, water dikinase
Displaying items 121-150 of 256 in total

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