ggKbase home page

SCNpilot_solid_1_scaffold_1_261

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 255096..256499

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 467.0
  • Bit_score: 869
  • Evalue 4.20e-250
  • rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 467.0
  • Bit_score: 869
  • Evalue 2.10e-249
3-isopropylmalate dehydratase large subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU42_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 466.0
  • Bit_score: 838
  • Evalue 3.70e-240
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGCCCCAAACCCTGTATGACAAGCTCTGGGATGCCCATGTGGTGCATCAAGGCCCGGACGGCACCTGTCTGCTGTACATCGACCGCCATCTGGTGCACGAAGTCACCAGCCCGCAGGCGTTCGAAGGCCTGGAGCTGGCGGGCCGCAAGCCCTGGCGCATCACCGCCAATCTGGCGGTGGCCGACCACAACGTGCCCACCACCGACCGCAGCCAGGGCATCCAGGACCCGATCTCGCGCCTGCAGGTCGATACCCTGGACAAGAACTGCGATACCTGGGGCATCACCGAATTCCGCATGAACGACCGGCGTCAGGGCATCGTGCACATCATCGGCCCGGAACAGGGCGCGACTTTGCCGGGCATGACCGTGGTCTGCGGCGATTCGCACACCAGCACCCACGGCGCCATGGGCGCCCTGGCCTTCGGCATCGGCACGTCCGAAGTCGAACACGTGCTGGCCACCCAGACGCTGCTGATGAAAAAGAGCCGCAACATGCTGGTGCGGGTCGAAGGCAAGCTGCCCTTCGGCTGCACGGCCAAGGACCTGATCCTGTACGTCATCGGCCAGATCGGCACGGCCGGCGGCACCGGCTACGCCATCGAATTCGGCGGCAGCACGGTGCGCGCGCTGTCCATGGAAGGGCGCATGACGGTCTGCAACATGGCGATCGAGGCGGGCGCGCGCTCCGGCATGGTGGCCGTGGACCAGACCACGATCGATTACTTCAAGGGCCGGCCCTACGCCCCCGAGGGCGCCCTGTGGGACCAGGCCGTCGATTACTGGAAGACCCTGCACTCCGATCCCGATGCGCAGTTCGACCGCGTGGTCGAGATCGACGCCGCGCGGATCGCGCCGCAGGTCAGCTGGGGCACTTCGCCCGAAATGGTCCTGCCGGTCGACGGCCGGGTGCCCGATCCCGACAAGGAAAAGGACGCGGTGCGCCGCAACGGCATGGAACGCGCGCTGCAATACATGGGCCTGGATCCCAATACGCCGATGACCGACATCAAGGTGGATCGCGTGTTCATCGGCTCGTGCACCAACGCACGCATCGAGGACCTGCGCGCGGCCGCCGCCGTAGCCAAGGGCCGCCGGGTGGCCGCCAATGTGCGCCAGGCCATGGTGGTGCCGGGCTCGGGGCTGGTCAAGGCCCAGGCCGAACGCGAAGGCCTTGACAAGATCTTCCTGGCCGCCGGCTTCGAATGGCGCGAGCCGGGCTGTTCCATGTGCCTGGCCATGAACGCCGACCGGCTCGAGCCCGGCGAGCGCTGCGCCTCGACCTCGAACCGGAACTTCGAGGGCCGCCAGGGGCAGGGGGGCAGGACCCACCTGGTCAGCCCCGCCATGGCCGCCGCCGCCGCGGTGGCGGGTCATTTCGTCGACGTCCGCCGTTTCAGCTAG
PROTEIN sequence
Length: 468
MPQTLYDKLWDAHVVHQGPDGTCLLYIDRHLVHEVTSPQAFEGLELAGRKPWRITANLAVADHNVPTTDRSQGIQDPISRLQVDTLDKNCDTWGITEFRMNDRRQGIVHIIGPEQGATLPGMTVVCGDSHTSTHGAMGALAFGIGTSEVEHVLATQTLLMKKSRNMLVRVEGKLPFGCTAKDLILYVIGQIGTAGGTGYAIEFGGSTVRALSMEGRMTVCNMAIEAGARSGMVAVDQTTIDYFKGRPYAPEGALWDQAVDYWKTLHSDPDAQFDRVVEIDAARIAPQVSWGTSPEMVLPVDGRVPDPDKEKDAVRRNGMERALQYMGLDPNTPMTDIKVDRVFIGSCTNARIEDLRAAAAVAKGRRVAANVRQAMVVPGSGLVKAQAEREGLDKIFLAAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGQGGRTHLVSPAMAAAAAVAGHFVDVRRFS*