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SCNpilot_solid_1_scaffold_1_262

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 256513..257169

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 215.0
  • Bit_score: 369
  • Evalue 4.90e-100
  • rbh
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CDM24399.1}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CDM24399.1};; Alpha-IPM isome similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 215.0
  • Bit_score: 369
  • Evalue 2.40e-99
3-isopropylmalate dehydratase small subunit n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UXM0_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 211.0
  • Bit_score: 366
  • Evalue 2.50e-98
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCAAGCCTTCACCACCCACCAGGGCCTGGCCGTTCCGCTGGACCGCGAGAACGTCGACACCGACCTGATCATTCCCAAGCAGTTCCTGAAATCGATCAAACGTTCCGGCTTCGGCCCGAATCTGTTCGACGAATTGCGCTATCTGGACCATGGCGAACCGGGCATGGACAATTCCCGCCGGCCGCTGAATCCGGACTTCATCCTGAATCAGCCGCGCTACAAGGGGGCCTCGATCCTGCTCGCGCGCAAGAACTTCGGCTGCGGCTCCAGTCGGGAACATGCCCCCTGGGCGCTGCAGCAGTTCGGTTTCCGCGCCATCATCGCGCCGTCGTTCGCCGACATCTTCTTCAACAACAGCTTCAAGAACGGCCTGCTGCCGATCGTGCTGCCCGAATCCCGGGTCGCCCGGCTGTTCGACGAGGTCAATGCCTTCCCGGGGTATACATTGACCATCGATCTGGAACGTCAGCGCGTGGTCTCCCCGGACGGCACCGAGTCGCCCTTCGAGATCGACGGCTACCGCAAGCAGTCCCTGCTCAAGGGCCTGGACGAGATCGGCCAGACCCTGCTGCGCGCCGACATGATCCGCGCCTTCGAGGCCGAGCGCCTGGCGCGCCATCCCTGGCTGGCCAAGTCCGCGCCCCACGCGTCCTGA
PROTEIN sequence
Length: 219
MQAFTTHQGLAVPLDRENVDTDLIIPKQFLKSIKRSGFGPNLFDELRYLDHGEPGMDNSRRPLNPDFILNQPRYKGASILLARKNFGCGSSREHAPWALQQFGFRAIIAPSFADIFFNNSFKNGLLPIVLPESRVARLFDEVNAFPGYTLTIDLERQRVVSPDGTESPFEIDGYRKQSLLKGLDEIGQTLLRADMIRAFEAERLARHPWLAKSAPHAS*