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SCNpilot_solid_1_scaffold_3_340

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(363901..364518)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U5J2_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 206.0
  • Bit_score: 291
  • Evalue 5.70e-76
LSU ribosomal protein L25p similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 205.0
  • Bit_score: 364
  • Evalue 1.90e-98
  • rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1437824 s similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 205.0
  • Bit_score: 364
  • Evalue 9.60e-98

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAAATTCACCGCCACTTCGCGTAGCGTCCAGGGTTCGAGTGCGAGCCGCCGCCTGCGCCGCGCCGGTCGGGTGCCCGCCATCGTTTACGGTGGCAAGTCCGGCCCGGCCAACATCGAACTCGACCACAACGAGATCTACCACGCCCTGAACAAGGAAGAATTCCACGCTTCCATCCTGGACATGGTCCTGGACGGCAAGACCGAGCCCGTGCTGGTGCGCGCCGTGCAATGGCACTCGTACCGCCCCCTGGTCCTGCACGTAGACTTCCAGCGCGTGGACGCGTCCCAGGCCGTGAGCACCAAGGTGCCGGTGCACTACCTGAACGCCGACCAGAGCCCGGCCGTCAAGCTCGCCGGCCAGGTCGTCACCCACGGTCCGTCCGAACTGGACATCACCTGCCTGCCTGCCAACCTGCCGAAGTTCATCGAAGTCGATCTGGGCAACATGATCGGCGGCGCCCGCCTGCACCTGGCCGACATCACGCTGCCGATCGGCGTGAAGTACGTGCCGCACGGCGACGACGTGAACCCACTGCTGGCCCAGGCCGCCGCCCCCAAGGGCTCGGCCGCCGATGACGACGCGGCCCCGGCCGCCGACGCGCCGGCTGCCGAATAA
PROTEIN sequence
Length: 206
MKFTATSRSVQGSSASRRLRRAGRVPAIVYGGKSGPANIELDHNEIYHALNKEEFHASILDMVLDGKTEPVLVRAVQWHSYRPLVLHVDFQRVDASQAVSTKVPVHYLNADQSPAVKLAGQVVTHGPSELDITCLPANLPKFIEVDLGNMIGGARLHLADITLPIGVKYVPHGDDVNPLLAQAAAPKGSAADDDAAPAADAPAAE*