ggKbase home page

SCNpilot_solid_1_scaffold_3_352

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(375420..376700)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transport system, membrane protein n=3 Tax=Bordetella bronchiseptica RepID=K4QLJ2_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 425.0
  • Bit_score: 691
  • Evalue 5.10e-196
  • rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:KCV67010.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bro similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 425.0
  • Bit_score: 692
  • Evalue 3.20e-196
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 425.0
  • Bit_score: 691
  • Evalue 1.40e-196
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGACGCTCGCATTGTTCATTGTTGTCCTGTTCGTCGGGCTTGCCATCGGGCTGCCGGTCGCGTATGCCCTGATTCTGACGGGCGTGGCGCTGATGTACCAGCTGGATTTCTTCGATGCCCAGATCGTCGCCCAGAATCTGTTGAACGGCGCCGACAGCTTTCCCCTGATGGCCGTTCCGTTCTTCATGCTCGCCGGCGCCGTGATGAACGCGGGCGGCCTGTCGCAGCGGATCGTGAATCTGGCCCTGGCGCTCGTCGGACACATCCGCGGCGGCCTGGGCTATGTCACCATCCTGGCGGCCAGCATTCTGGCCAGCCTGTCCGGTTCCGCCGCCGCCGATGCCGCCGCCCTGTCCGCGCTGCTGGTGCCGATGATGATGAAGGCGGGGAATTCCAGAGGACGGTCGGGCGGGCTGGTGGCCTCTTCGGGAATCATCGCGCTGGTCATTCCGCCTTCCATCGGCCTGATCCTGATCGGGGTCACCGGCAACATCTCCATCACGGGCCTGTTCATGGCGGGGATCGTGCCGGGGATCCTGATGGCGCTGTGCCTGTGCGCGACCTGGTTTCTGGTGTCGCGCCGGGACAAGATCGCGCCGCTGCCCAAGGTTCCCGCCAGGGAAGTGCTGTCCCTGGTGATCAAGAGCTTCTGGGCGCTGCTGCTGCCCGTGATCATCATCGTCGGCCTGCGCTTTGGCGTGTTCACGCCGACCGAGGCCGGCGTGGTGGCCGCCGTCTATGCCCTGTTCGTGGCGACGTGCATCTATCGCGAGCTGCGGCTGAATCAGCTGTACGAGGTCTTTCTGGAATCCGCCAAGATGAGCGCGATGGTGATGTTCCTGGTCGCCGCCGCGCTCGTGTCGGGATGGATGATCACGATCGCCGGCCTGCCTCATCAGGTGATGGCGCTGGTGGAACCGGTCAAGGATTCCCCCACCTTGCTCATGCTGGTGATCGTCGGCCTGGTCCTGGTGGTCGGGACGGCGATGGACATGATCCCGATCGTGCTGATCCTGATCCCGGTCCTGTTGCCCGCCGTGGTGGCGGCGGGCATCGATCCCGTGTATTTCGGCATCGTGTTCATGCTGGCCTGCTCCATCGGGCTGATCACGCCGCCCGTGGGCGCCGTGCTCAACGTGGTGGCCGGCGTGACCAAGGCCCGGATGATCGAGGTCATCGTGGGGGTCTGGCCGTTCCTGGCGGCGCAATGCGTGGCCTTGCTGCTGCTGATCCTCTTCCCCCAGCTGGTGCTGGCCCCTTACCGATGGATCATGGGATAG
PROTEIN sequence
Length: 427
MTLALFIVVLFVGLAIGLPVAYALILTGVALMYQLDFFDAQIVAQNLLNGADSFPLMAVPFFMLAGAVMNAGGLSQRIVNLALALVGHIRGGLGYVTILAASILASLSGSAAADAAALSALLVPMMMKAGNSRGRSGGLVASSGIIALVIPPSIGLILIGVTGNISITGLFMAGIVPGILMALCLCATWFLVSRRDKIAPLPKVPAREVLSLVIKSFWALLLPVIIIVGLRFGVFTPTEAGVVAAVYALFVATCIYRELRLNQLYEVFLESAKMSAMVMFLVAAALVSGWMITIAGLPHQVMALVEPVKDSPTLLMLVIVGLVLVVGTAMDMIPIVLILIPVLLPAVVAAGIDPVYFGIVFMLACSIGLITPPVGAVLNVVAGVTKARMIEVIVGVWPFLAAQCVALLLLILFPQLVLAPYRWIMG*