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SCNpilot_solid_1_scaffold_3_354

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(377300..378319)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transport system, solute-binding protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TTI1_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 338.0
  • Bit_score: 527
  • Evalue 1.30e-146
  • rbh
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 338.0
  • Bit_score: 525
  • Evalue 1.40e-146
  • rbh
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:KDD49233.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 338.0
  • Bit_score: 525
  • Evalue 7.10e-146

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGTCGTTCAAGATGAAAACCGTCGTGGCGGGCGTGGCCGCCGCCCTGCTGGCTTCCGTGGCCGGCCAGGCCTCGGCCGAGGTCAAGGACCGCAGCATGAAGTTCAGCTACGCGGTCAGTGCGACCAATCCCGTGGGCCTGGCCGCCCAGAAATTCATTGACGTCGCCAGCGAAAAGACGGGCGGCAAGTTCAAGATCACCGGCTATCCGGACGCCCAGCTGGGCAATGAAATCCAGTCCATGTCCTCCGCGCAGGGGGGCATTGTCGAGCTGACGGTCGCCTCCACCGCCGGGGCGGCCAGCAACGTCAAGGAACTCGGGATCTTCGACCTGCCGTTCCTGTTCCATTCGGTTGAAGAAGCCGATGCCGTGGTGGATGGTCCCGTCGGGAAGCGCCTGCTGGACAAGTTTTCCAGCAAGAACCTGGTGGGGCTGTGCTATTGGGATTATGGGTTCCGCCAGGTCTCCAACAGCAAGCACCCGATTCGCAAGCTCGAGGACTTCGACGGCCTGAAGCTGCGGGTCCTGCAAAACCGCATTTATATCGATACGTTCAAGGCGCTGGGGGCCAATCCGCTGCCGCTGCCGTATCCGGAAACCTATACGGCCCTGGAAAGCAAGGCGATCGACGGGCAGGAAAGCTCCTTCCTGGTCACCAAGAGCAGCGGATACCAGGAAATCCAGAAATACCTGACCGAGACCCAGCACGTCTTCCTGCCCGCGGTCGTGCTGGCCAGCAAGCGGTTCTGGGATCGCCTGAGCCCCGAAGAACAGACCGTCCTGCGGGACTCCTGCGCGGAATCCGTGACGTATTTCCGCCAGGTCAGCCGCCAGATGGAAAAGGACGTCGTCAAGGAACTGGAGGCCGCCGGCATGGAGTTCAACCAGATCGAGCCGGCGGAAAAAGCCCGGATGGTCGAGGCGACCGCTTCCGTGACGGAGAAGTACAAGGCCGAATTGGGCGCGGACCTGGTCGACGAGACCCTGGCCACGATCCAGAAGGTCCGGAACAAGCAATAA
PROTEIN sequence
Length: 340
MSFKMKTVVAGVAAALLASVAGQASAEVKDRSMKFSYAVSATNPVGLAAQKFIDVASEKTGGKFKITGYPDAQLGNEIQSMSSAQGGIVELTVASTAGAASNVKELGIFDLPFLFHSVEEADAVVDGPVGKRLLDKFSSKNLVGLCYWDYGFRQVSNSKHPIRKLEDFDGLKLRVLQNRIYIDTFKALGANPLPLPYPETYTALESKAIDGQESSFLVTKSSGYQEIQKYLTETQHVFLPAVVLASKRFWDRLSPEEQTVLRDSCAESVTYFRQVSRQMEKDVVKELEAAGMEFNQIEPAEKARMVEATASVTEKYKAELGADLVDETLATIQKVRNKQ*