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SCNpilot_solid_1_scaffold_8_120

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(137302..138276)

Top 3 Functional Annotations

Value Algorithm Source
Thiamin biosynthesis lipoprotein ApbE similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 341.0
  • Bit_score: 544
  • Evalue 2.80e-152
  • rbh
Thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CDM25035.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 341.0
  • Bit_score: 544
  • Evalue 1.40e-151
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein id=5080006 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 322.0
  • Bit_score: 409
  • Evalue 3.80e-111

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGCCGAAGATGTATTCTGATCCGGCGGCCGGATCGACCCTGAGCGGCCCGACCATGGGGACGCGCTGGTCGGCCCGCTACCAGGCGCCGCCGGGCTTCGATCATGAAGCACTGTCGCGCGATCTGGCCCGGGCGGTGGATCTGGTGGATGCGCAGATGTCCCCCTGGAAGCCGGACAGCGATCTGATGCGCCTGAACCGGGCCGAGCCGCGACAGTGGGTGACGCTGCCCGGGGCGGTGCTCGATGTGCTGGCGCGCGCGCTGGACGTCGGGGCCCTGAGCGGCGGCGCTTTTGACGCAGCCGTCGGCGGTCTGGTCGACGCCTGGGGATTCGGCGCGGCGACGGACGCGCCCGACCCGGCCGCCATCCGGCTGGCCGCCGCCGACCATCGTCCCGCCCATCTCTGGCTGGACGTCGATCAGGCGCAAGGCCGCGCGCGCAAACGGGCGCCCCTGACGCTCGATCTGTGCGGGATCGCCAAAGGCTATGCGGTGGACCGGATGGCCCAGGTCATGGCCGATCATGGTATCGGTCATGCGCTGCTCAGCCTGGATGGGGAAGTCAGGGCATGCGGCAGCCGGGCCGATGGCCGGCCCTGGGCCGTGGCCCTGGAAAGCCCGCAGGAAGGCCGCCGTGCGGCCCACGGCGTGATCGAACTGAGCGATCTGGCCGTGGCGACGTCGGGCGATTACCGCCACTGGGTCCAGGCGGGCGGCGAACGCCTGGCGCACACCATGGATGGCCGCCGCGCGGCGCCCGTGCGCAACCCGGTGGCGTCCGTCACGGTGCTGGCGCGGGCGTGCATGGATGCCGATGCCTGGGCGACGGCGCTGCTCGTGGCGGGGCCGGGCGAAGGGCCGGCGCTGGCCCGGCGCCTGGGGCTGGACGCCTTGTTTCTGCTCAGGCGCGAGGGTCGGCTGGTGGAATTCGGGGTAGGCCGTTTTGCGCATTCCCCCGCCGGCCCGCAGCCATGA
PROTEIN sequence
Length: 325
MPKMYSDPAAGSTLSGPTMGTRWSARYQAPPGFDHEALSRDLARAVDLVDAQMSPWKPDSDLMRLNRAEPRQWVTLPGAVLDVLARALDVGALSGGAFDAAVGGLVDAWGFGAATDAPDPAAIRLAAADHRPAHLWLDVDQAQGRARKRAPLTLDLCGIAKGYAVDRMAQVMADHGIGHALLSLDGEVRACGSRADGRPWAVALESPQEGRRAAHGVIELSDLAVATSGDYRHWVQAGGERLAHTMDGRRAAPVRNPVASVTVLARACMDADAWATALLVAGPGEGPALARRLGLDALFLLRREGRLVEFGVGRFAHSPAGPQP*