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SCNpilot_solid_1_scaffold_31_39

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(40117..40476)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FF16E2 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 119.0
  • Bit_score: 221
  • Evalue 5.50e-55
LSU ribosomal protein L20p similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 228
  • Evalue 7.40e-58
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 228
  • Evalue 3.70e-57

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCTCGCGTCAAACGCGGCGTCACGGCTCGTGCACGCCATAAAAAAGTTCTCAAGGCCGCCAAAGGCTACCGCGGCCGCCGCGGCAACGTATTCCGGATCGCCAAGCAGGCGGTCATGCGCGCCGGCCAGTACGCCTATCGCGATCGCCGCAATAAAAAGCGCACCTTCCGCGCTCTGTGGATCACCCGCATCAATGCGGGCTGCCGTGAACTCGGCGTGACCTACAGCGTGTTCATCGCCGGCCTGAAGAAGGCTTCGATCGAACTCGACCGCAAGGTCCTGGCCGACATGGCCGTCAAGGACAAGGCCGGCTTCGCTGCCATTGTGGCCCAGGCGAAGTCCGCACTGGCAGCCTAA
PROTEIN sequence
Length: 120
MPRVKRGVTARARHKKVLKAAKGYRGRRGNVFRIAKQAVMRAGQYAYRDRRNKKRTFRALWITRINAGCRELGVTYSVFIAGLKKASIELDRKVLADMAVKDKAGFAAIVAQAKSALAA*