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scnpilot_solids1_trim150_scaffold_2287

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2287_1
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1083)
DNA (1083bp) protein (361aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDW4_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGB57530.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
TonB-dependent receptor rbh
scnpilot_solids1_trim150_scaffold_2287_2
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1152..3542
DNA (2391bp) protein (797aa)
Patatin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHP4_9SPHN
Patatin {ECO:0000313|EMBL:KGB57529.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
patatin rbh
scnpilot_solids1_trim150_scaffold_2287_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3573..4691)
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6M3_9SPHN rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ rbh
scnpilot_solids1_trim150_scaffold_2287_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4812..6728)
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI59_9SPHN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
scnpilot_solids1_trim150_scaffold_2287_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6882..7391
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY64_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83154.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09796 hypothetical protein
scnpilot_solids1_trim150_scaffold_2287_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7431..7895)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A053
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65057.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_2287_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8121..8522
DNA (402bp) protein (134aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2B0_CAUSK
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KGB52711.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_2287_8
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8519..8896
DNA (378bp) protein (126aa)
Anti-FecI sigma factor FecR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SI57_9SPHN
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:KGB52710.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_2287_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8890..9528
DNA (639bp) protein (213aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Caulobacter sp. AP07 RepID=J2H5F9_9CAUL
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:KGB52710.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
Displaying 9 items

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