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scnpilot_solids1_trim150_scaffold_5346_1

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(1..588)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV09_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 187.0
  • Bit_score: 343
  • Evalue 1.20e-91
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 187.0
  • Bit_score: 343
  • Evalue 1.70e-91
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 187.0
  • Bit_score: 338
  • Evalue 1.20e-90

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAAGACGACTCTTCCGACGAGGAAGAAGCCGGCCCCAGCGGTCCCGATCCGGATCGTCAAGCTGCGCGACCAGATGGCCGAGGAGTTCCTCAAGCTCAAGCTGCCCAGCGCGCTGATCGACGGCTTCGTGCGCAAGCTGCGCGAGGTGGTCGGCGACATCCGCCACCACGAGCGCGTGCTGATGGACATCTTCGTCAAGCAGGTGAAGATGCCCAAGGCCGAGTTCATCAAGGCCTTCCCCAGCAACGAGGGCAACCCCGAGTGGGTCGCCGAGCTGAGCCGCAAGCGGCAGAAGTGGTCGCCGAACATCAAGGTCCATCGCGAGGCGATCGACGCCGAGCAGGAGAAGCTGGCCGCGATCGAGCGCAAGCTGTTCCTGCCGCTCACCGACATCAAGGACATCAACCGCGCCATGGCCTCGGGCGAGGCCAAGGCCCGCCGCGCCAAGAAGGAAATGGTCGAGGCGAACCTGCGCCTGGTGATCTCCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAATACCGC
PROTEIN sequence
Length: 196
MKTTLPTRKKPAPAVPIRIVKLRDQMAEEFLKLKLPSALIDGFVRKLREVVGDIRHHERVLMDIFVKQVKMPKAEFIKAFPSNEGNPEWVAELSRKRQKWSPNIKVHREAIDAEQEKLAAIERKLFLPLTDIKDINRAMASGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR