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scnpilot_solids1_trim150_scaffold_5346_2

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(772..1155)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 98.0
  • Bit_score: 190
  • Evalue 8.50e-46
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 98.0
  • Bit_score: 190
  • Evalue 1.20e-45
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 98.0
  • Bit_score: 168
  • Evalue 1.40e-39

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGAACAGCAAAGCTCCCCACGAGCAACAGTCGGAAATCAAGGCACTCATCTCGAAGGGCCTGGAGCAGGGCTATCTGACCTACGCCGAAATCAACGATCACCTCCCCGACGACATCGTCGACCCGGAGCAGATCGAGGACATCATGGCGGTGCTCAAGGGCGTCGGCATCGAAGTGCACGACGCCGCGCCGGACACCGACACGATCTCCGACAGCGCCGCCCCCGGCGGCGGCTCGGGCGACGACGACTCCGCGGCCGAGGAAGCCGTGGCGCTGCTCTCCGCGGTGGACGGCTGCTCACCCGCGAGGGCGAGATCGCCATCGCCAAGCGCATCGAGGAAGGCCTGGGCCAGGTGCAGACCGCGCTGGCCAGCTTCCCGCTGA
PROTEIN sequence
Length: 128
MNSKAPHEQQSEIKALISKGLEQGYLTYAEINDHLPDDIVDPEQIEDIMAVLKGVGIEVHDAAPDTDTISDSAAPGGGSGDDDSAAEEAVALLSAVDGCSPARARSPSPSASRKAWARCRPRWPASR*