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scnpilot_solids1_trim150_scaffold_73_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 1306..2235

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3AXW7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 297.0
  • Bit_score: 403
  • Evalue 1.50e-109
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJF70043.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 298.0
  • Bit_score: 465
  • Evalue 7.90e-128
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 296.0
  • Bit_score: 388
  • Evalue 2.10e-105
  • rbh

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGCTGACTCTCCGCCAGATCGAAATCATCCGCGCCATCATGGTGACGGGCAGCATCGCAGGCGCTGCGCGGCTGCTCAACGTGGCGGCGCCCGGGATCAGCCGCCTGATGAAATATTCCGAGGATTCGCTGGGTGTGCGCCTGTTCGACCGGCGCGCCGGACGCTATGTGCCGACGCCCCAGGCGCGCCACATCTTCGATCTGCTCGACACGGTCCACCGCAAGATCGGCGATCTCCAGTCCGCCGTCGACGGCCTGGCGCGCGGTGAAAGACAGGAACTGTGCATCGCCTCGGTGCCGAGCATCGCCAACGTCATGGTGCCGCGCGCCATAGCGGCGCTCCGGCTGCGCTATCCCGACCTCGCGCTGGACGTGAACATCCTGAAGATCGAGGAGGCGATCGACTACCTGTTGCTCGGGCGGGGCGAGCTTGTCGCGATCTCCTCGCGTTTCGATCACCCTTTGATAACGTTCGAACCTCTCGCCGCCGGCCGCCTCCTCTGCATCGTGCCCGAGAACAGCCCGCTTTCCGGGCGCAAGCGCATCATGCCCGCGGAAATGGCCGAATTCTCCCTGATCGGGATCAACCCCACGGACCCCTATGGCGCGATCATGGCCGCCATGTTCGAGAACGCCGGCGTGGAATACCGCATGAACATCAAGGCAAGGTTCGGGACAACCGTCTGCAGCCTCGTCGCGGCCGGGCTGGGGATTGCGATCATCGACGAGTTCACCGTCGCCCACGGCCAGGTACCGGGGCTCAAGCGGCTTGAGATCGATGCCGAAAGCACCTTCCATACCTATGCGGCCTACAGGAGCGAGGTGGCCCTCTCCGCGTTCGCCGATGCCTTCCTTCAAAATCTGCGACGGGAGATGGTGGCTGCCAGCACTGTCGGTAAAATGCAGGCTTCGCCAAGTAGGCAGCCATAA
PROTEIN sequence
Length: 310
VLTLRQIEIIRAIMVTGSIAGAARLLNVAAPGISRLMKYSEDSLGVRLFDRRAGRYVPTPQARHIFDLLDTVHRKIGDLQSAVDGLARGERQELCIASVPSIANVMVPRAIAALRLRYPDLALDVNILKIEEAIDYLLLGRGELVAISSRFDHPLITFEPLAAGRLLCIVPENSPLSGRKRIMPAEMAEFSLIGINPTDPYGAIMAAMFENAGVEYRMNIKARFGTTVCSLVAAGLGIAIIDEFTVAHGQVPGLKRLEIDAESTFHTYAAYRSEVALSAFADAFLQNLRREMVAASTVGKMQASPSRQP*