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scnpilot_solids1_trim150_scaffold_73_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 2431..3240

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase protein {ECO:0000313|EMBL:AIC25271.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AIC25271.1};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 266.0
  • Bit_score: 326
  • Evalue 2.90e-86
shikimate dehydrogenase substrate binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 264.0
  • Bit_score: 251
  • Evalue 3.50e-64
Shikimate dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJM0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 264.0
  • Bit_score: 290
  • Evalue 1.30e-75

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGACGGGGTTTCAAATATCGGGAGAAACGCGGCTTTTGCCGGTTGTCGGTGATCCGATCAGCCAGGTTCTGTCGCCGGCCGCCCTGACCGCGCGGCTTGCCGAACGCGGCGAAGATGTCATCGTGGTCCCGTTTCATGTTCCCGCGCCGGAATTGCGGCAGGCCTTCGCCACTTTCCGGGCCGCCCGCAACATCCCCGGCGCCCTGGTCACGATCCCGCATAAGCAGGCCGCGCTGCAGCTTTGCTCGGACGCGACCGGGAGGGCGCGATTCGCGGGCTCCGCCAATGTCTTGAGAAAGACCGCGACCGGCTGGTCGGGCGACAACACGGATGGCTGCGGGTACATGGACGGCGTCGCCGAGCGCGGGTTTTCGGTGAAAGGCAAGTCGGCTCTGCTTGTCGGCTGCGGAGGAGCCGGGTCGGCGATAGCCTATGAGATCTTGCTGCGCGGCGCCGGCCGGGTTGCGTTGCACGACACCGATGCGGGCAGGCGCGACGGGCTTGTGACGCGTCTTTCGGCGGCGTTTCCCGGCCGTGTCCATCCTGGCGGCGCCGACCCGACGGGCTACGATCTGGTGGCCGACGCGACGCCGATGGGCATGCGCCCCGACGATCCCCTGCCGATCCTGGCCGATCGGCTGACGGCAGGACAGTTTGTCGCCTGCGCCGTCACCAGGCCGGCGGTTCCGCCCCTTGTCGAGGAGGCCCGCAAGCGCGGCTGCAAGACGATGACCGGCGCCGGCATGTTCGAGGCGCAAGCAGGTACGCTGATTGATTTTTTGCTCGCGCCGGAGCCCTTGGATGCATAA
PROTEIN sequence
Length: 270
VTGFQISGETRLLPVVGDPISQVLSPAALTARLAERGEDVIVVPFHVPAPELRQAFATFRAARNIPGALVTIPHKQAALQLCSDATGRARFAGSANVLRKTATGWSGDNTDGCGYMDGVAERGFSVKGKSALLVGCGGAGSAIAYEILLRGAGRVALHDTDAGRRDGLVTRLSAAFPGRVHPGGADPTGYDLVADATPMGMRPDDPLPILADRLTAGQFVACAVTRPAVPPLVEEARKRGCKTMTGAGMFEAQAGTLIDFLLAPEPLDA*