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scnpilot_solids1_trim150_scaffold_403_19

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_69_91

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(22366..23568)

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein pilT n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B51210 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 359.0
  • Bit_score: 503
  • Evalue 1.90e-139
  • rbh
Twitching motility protein {ECO:0000313|EMBL:KHD78885.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 358.0
  • Bit_score: 447
  • Evalue 2.20e-122
pilT; putative type IV pilus retraction protein PilT; K02669 twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 369.0
  • Bit_score: 444
  • Evalue 3.20e-122
  • rbh

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
GTGACCATGCTGACCGATTCGATGGGCATGCCGAGCCGCCGTCATGCGGCCGACGATGCTCCCGACGCCCCTGCCGCGGCCGGGTATGACGCCGCCCCCGTCGCAGAGCGGATCGGGCCCGGCCCGATGTCCCGTGCCGGCACCGAGGAACTCGACCGGCTGCTGACCATCATGGTGGAAGCGGGCGGCTCCGACCTGCACATCACGGCCGGCATCGCGCCGTGCGTGCGCATCGACGGCGAGTTGCGGCCGCTGGAGAACGAGCGGACCCTGCTGCCGGACGACACCGAGAAGCTCATCCGCTCCTTCGTGGCCGAGGACCGGTGGGACCGCTTTCTCGATGAGCACGAGCTCGACACCTCCTACGCGGTGCCGGGCGTCAGCCGTTTCCGCGTCAATGTGTTTCGTCAGCGCGGTTCGGTCGGTGCGGCGTTCCGGTCCATCCCGCACCGCATCCGGAACCTCTCCGAGTTGGGCGTGCCGGACTCGGTCGAGCAGTTCGCGCACCTGCCGCGCGGTTTGGTGCTGGTGACCGGGCCGACCGGCTCCGGCAAGTCCACCACCATGGCGTCGCTGCTAGACGTGGCCAACCGGACGCGGTCCGGGCATATCGTCACCATCGAGGACCCGATCGAGTACCTGCACAAGCACGGCACCTGCGTGGTGAATCAGCGTGAGGTCGGCAGCGATACGGCGGATTTCGCGACCGCTTTGAAGCACGTGCTGCGGCAGGACCCGGACATCATCCTGATCGGCGAGCTGCGGGATCTGGAGACCACATCGGTCGCCATCACCGCCGCGGAGACCGGGCATCTGGTGCTGGCCACCCTGCACACCAAGTCTGCGGCGCAGACCATCGACCGGCTCATCGACATCTTCCCGCACTCGCAGCAGCAGCAGATCCGCTCGCAGTTGGCCAATGCGCTGGAGGGTGTCGTGACGCAGGCGCTGCTACCGCGTCGCGACGGAGGGCGGGCGGTGGTCTGCGAGGTGATGATCTCCACGCCGGCGATCCGGGCGCTGATCCGCGAGGACAAGGTGCATCTGATCCCCGGCTACATCCAGTCCGGCAGCGATGTCGGCATGATCGGCTTCGATCAACACCTGGCCGATCGCTACCGCGAGCAGATCATCACGAAGCACACCGCGCTGGAGATGGCGCAGGATCCGGAAGTGTTCCGGCAACTGGCTGGGCTGGCGTAG
PROTEIN sequence
Length: 401
VTMLTDSMGMPSRRHAADDAPDAPAAAGYDAAPVAERIGPGPMSRAGTEELDRLLTIMVEAGGSDLHITAGIAPCVRIDGELRPLENERTLLPDDTEKLIRSFVAEDRWDRFLDEHELDTSYAVPGVSRFRVNVFRQRGSVGAAFRSIPHRIRNLSELGVPDSVEQFAHLPRGLVLVTGPTGSGKSTTMASLLDVANRTRSGHIVTIEDPIEYLHKHGTCVVNQREVGSDTADFATALKHVLRQDPDIILIGELRDLETTSVAITAAETGHLVLATLHTKSAAQTIDRLIDIFPHSQQQQIRSQLANALEGVVTQALLPRRDGGRAVVCEVMISTPAIRALIREDKVHLIPGYIQSGSDVGMIGFDQHLADRYREQIITKHTALEMAQDPEVFRQLAGLA*