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scnpilot_solids1_trim150_scaffold_403_20

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_69_91

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 23785..25446

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3781D similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 556.0
  • Bit_score: 825
  • Evalue 2.90e-236
  • rbh
Type II secretion system protein E {ECO:0000313|EMBL:KHD78884.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 555.0
  • Bit_score: 680
  • Evalue 2.10e-192
pulE; General secretion pathway protein E; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 555.0
  • Bit_score: 677
  • Evalue 4.10e-192
  • rbh

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1662
ATGGACCCTGCCAGCCAGACCGTGATCGCTGCGCTGCGGGCCCGTGGCACCGATGAGGATGCCCTGCAGCGGGCAGTCGCTACCGCGGTGAGCGGCGAGCGGCCGGTCCGCACCGTCCTGGTGGACGACCAGATCGTCACCGAATTCGAGCTGGCCTCGGCCATCGCCGCCTTCTACGGCATGGAGGTGGGCGACCTCGGCTCGCTCGCCGTGGACCCGACCGCCATGAAGCTGCTGGCCCTGCCGCTGGCCCGCCGGCACCAGATGGTCCCGATCTCCACCACCACGACCACCGTCACGGTGGCGCTCACCGACCCGGGCAACGTGCTCGCGCTGGACGACATCCGCGCCGCCACCGGCCTGCAGGTGCACCCGCTGGTCGTGACGGACGGCGATCTCACCCGCCTGCTGGACCGCTACAGCCGCTCCACCACCGACCTGGACGAGGCGGCCGCCGCGATCGCCGCGGAGGAGTCCATCGAGGACGAGATCGCCGTCGATGACGACGCCCCCGTGGTGCGCTACGTCTCGTCATTGCTGGAGCGCGCGATCACGGCCCGTGGCTCGGACATCCACGTGGAGCCCGGCGAGGACAACGTGCGCGTGCGGCTGCGCATCGACGGCGTGCTGCACGAGATCGACACGGTGCCGCGGCAGATCCAGTCGGCGCTGCTGTCCCGGCTCAAGATCATGTCGGGACTGGACATCACGGAGCGCCGCGTGCCCCAGAACGGCCGTATCACCATGGATCTCGGCGGCCGGCACGTCGATCTGCGCACCGCCACGCTGCCCACGGTGTGGGGCGAGAAGATCGTGCTGCGCATCCTGGACACCGGTGGTATCGACCTCGACCTGCGCAAACTCGGATTCACCGACAAGAACTACGACCGGTTCGCCGCGAGTTTCCGCAAACCGCACGGCATGGTCCTGGTCACCGGACCGACGGGCTCGGGCAAATCGACCACCCTGTACGCCACGCTCGGCGAGATCGCCCGGCCCGAGGTCAACGTGATCACCGTGGAGGACCCGGTCGAGTACCGGATCGGCGGCATCAGCCAGATCCAGGTGAACATCAAGGCCGGCCTCACCTTCGCCGCCGTGCTGCCCGCCATCCTGCGGTCCGACCCGGACGTGGTGCTGGTCGGTGAGATCCGCGACCAGGTGACCGCCCAGCTGGCGATCGAGGCCGCGCTCACCGGCCACCTGGTGCTGTCCACCCTGCACACCAACAACGCGCCGTCGGCGATGACGCGGCTCGTGGAGATGGGCATCGAGCCATTCCTGGTGGGCTCGTCGGTGGACGCCGTGCTGGCCCAACGGCTGGTGCGCCGCCTGTGCGATTGGTGCAAGGAGCCCTACCAGCCGAGCGACCAAGAGCTGGACGGCGCAGGCTGGCCCTCCTCGCAGGAGACACCCGGGCAGCTCTTCCGCGCGGTCGGCTGCCGCTCCTGCTCGGCCACCGGCTACCGCGGCCGGCTCGCCGTCAACGAGGTGATGCCGGTGTCCGAGGAGATCGAGCGGCTCACCGTGGGGCACGCCCCGGCCAGCGAACTCGCCCGGGTCGCCGTAGCGGAAGGTATGACGACACTGCGCGAGGACGGCCTCGCCAAGGCCGCATCCGGCACCACGACGCTCGAAGAAGTGCTGCGCGTCACAGTTTAG
PROTEIN sequence
Length: 554
MDPASQTVIAALRARGTDEDALQRAVATAVSGERPVRTVLVDDQIVTEFELASAIAAFYGMEVGDLGSLAVDPTAMKLLALPLARRHQMVPISTTTTTVTVALTDPGNVLALDDIRAATGLQVHPLVVTDGDLTRLLDRYSRSTTDLDEAAAAIAAEESIEDEIAVDDDAPVVRYVSSLLERAITARGSDIHVEPGEDNVRVRLRIDGVLHEIDTVPRQIQSALLSRLKIMSGLDITERRVPQNGRITMDLGGRHVDLRTATLPTVWGEKIVLRILDTGGIDLDLRKLGFTDKNYDRFAASFRKPHGMVLVTGPTGSGKSTTLYATLGEIARPEVNVITVEDPVEYRIGGISQIQVNIKAGLTFAAVLPAILRSDPDVVLVGEIRDQVTAQLAIEAALTGHLVLSTLHTNNAPSAMTRLVEMGIEPFLVGSSVDAVLAQRLVRRLCDWCKEPYQPSDQELDGAGWPSSQETPGQLFRAVGCRSCSATGYRGRLAVNEVMPVSEEIERLTVGHAPASELARVAVAEGMTTLREDGLAKAASGTTTLEEVLRVTV*