ggKbase home page

scnpilot_solids1_trim150_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_20_1
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..846)
DNA (846bp) protein (282aa)
Polyketide synthase like protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FP06_9CLOT
Polyketide synthase like protein {ECO:0000313|EMBL:EMS73637.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_20_2
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(863..4108)
DNA (3246bp) protein (1082aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034CF881
Uncharacterized protein {ECO:0000313|EMBL:KIE08031.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
amino acid adenylation enzyme/thioester reductase family protein
scnpilot_solids1_trim150_scaffold_20_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4300..4989)
DNA (690bp) protein (230aa)
4'-phosphopantetheinyl transferase; K06133 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
Putative phosphopantetheinyl transferase n=1 Tax=Kordia algicida OT-1 RepID=A9EDA6_9FLAO
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:BAP58038.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_solids1_trim150_scaffold_20_4
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4976..5665)
DNA (690bp) protein (230aa)
Thioesterase n=1 Tax=Kordia algicida OT-1 RepID=A9EDB4_9FLAO
Thioesterase {ECO:0000313|EMBL:EDP94252.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
thioesterase
scnpilot_solids1_trim150_scaffold_20_5
unknown

Not on your lists

comp(5718..5939)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_20_6
Nostoc sp. 'Peltigera membranacea cyanobiont', Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5982..9179)
DNA (3198bp) protein (1066aa)
amino acid adenylation domain-containing protein (EC:5.1.1.13 1.2.1.31)
Non-ribosomal peptide synthase n=1 Tax=Nostoc sp. 'Peltigera membranacea cyanobiont' RepID=G0TE92_9NOSO rbh
Non-ribosomal peptide synthase {ECO:0000313|EMBL:ADL59764.1}; TaxID=414689 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. 'Peltigera membranacea cyanobiont'.;"
scnpilot_solids1_trim150_scaffold_20_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9221..10645)
DNA (1425bp) protein (475aa)
Penicillin-binding protein, beta-lactamase class C id=2128327 bin=GWE2_Bacteroidetes_42_24 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
beta-lactamase
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids1_trim150_scaffold_20_8
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10825..12792)
DNA (1968bp) protein (656aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:KGE86195.1}; EC=6.2.1.16 {ECO:0000313|EMBL:KGE86195.1};; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16] rbh
Acetoacetyl-CoA synthase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4K6_HALH1 rbh
scnpilot_solids1_trim150_scaffold_20_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13124..13528
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036405FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97935.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_20_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13673..14047)
DNA (375bp) protein (125aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1H4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30848.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids1_trim150_scaffold_20_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14031..14657)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036A4C27
Uncharacterized protein {ECO:0000313|EMBL:AHF17740.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_20_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14635..15270)
DNA (636bp) protein (212aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAZ3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42081.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane lipoprotein carrier protein LolA
scnpilot_solids1_trim150_scaffold_20_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15263..16036)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381D782
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACU59364.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_20_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16030..17079)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CD7D1 rbh
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHF15900.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
beta-ketoacyl synthase rbh
scnpilot_solids1_trim150_scaffold_20_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17079..18278)
DNA (1200bp) protein (400aa)
Beta-ketoacyl synthase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1H6_9SPHI rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:EHQ30850.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-ketoacyl synthase rbh
scnpilot_solids1_trim150_scaffold_20_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18377..18628)
DNA (252bp) protein (84aa)
Phosphopantetheine-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQD5_9SPHI
Acyl carrier protein {ECO:0000313|EMBL:AHF15902.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphopantetheine-binding protein; K02078 acyl carrier protein
scnpilot_solids1_trim150_scaffold_20_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18621..19265)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1H7_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30851.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_20_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19410..20666)
DNA (1257bp) protein (419aa)
Tryptophan halogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY7_CHIPD rbh
tryptophan halogenase rbh
Tryptophan halogenase {ECO:0000313|EMBL:AHF15903.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_20_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(20903..21973)
DNA (1071bp) protein (357aa)
O-methyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003658337 rbh
type 12 methyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_20_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22013..23155)
DNA (1143bp) protein (381aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] rbh
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Niabella soli DSM 19437 RepID=H1NQJ1_9SPHI rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:AHF15906.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_20_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23272..23697)
DNA (426bp) protein (142aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQJ2_9SPHI
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KIC95146.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_20_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23739..24386)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42091.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_20_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24383..24811)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365DF57
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ {ECO:0000313|EMBL:EHQ30853.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_20_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25013..25645
DNA (633bp) protein (211aa)
Transcriptional regulator, TetR family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPG8_9SPHI
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC95698.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_20_25
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25664..26944
DNA (1281bp) protein (427aa)
Outer membrane efflux protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPZ7_9SPHI rbh
Transporter {ECO:0000313|EMBL:KIC61317.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
outer membrane efflux protein rbh
scnpilot_solids1_trim150_scaffold_20_26
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26962..27912
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037CF328 rbh
Secretion protein {ECO:0000313|EMBL:AIZ65082.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
secretion protein HlyD family protein; K01993 HlyD family secretion protein rbh
scnpilot_solids1_trim150_scaffold_20_27
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27916..28872
DNA (957bp) protein (319aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Arcticibacter svalbardensis MN12-7 PF7_9SPHI">RepID=R9GPF7_9SPHI rbh
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:EOR93598.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
sulfate-transporting ATPase rbh
scnpilot_solids1_trim150_scaffold_20_28
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28872..29615
DNA (744bp) protein (248aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP37_9SPHI rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOR93597.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_20_29
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29632..30738
DNA (1107bp) protein (369aa)
ABC transport system, permease component YbhR n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPG1_9SPHI rbh
ABC transport system, permease component YbhR {ECO:0000313|EMBL:EOR93596.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter; K09686 antibiotic transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_20_30
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30735..31856
DNA (1122bp) protein (374aa)
ABC transporter permease protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPZ0_9SPHI rbh
ABC transporter permease protein {ECO:0000313|EMBL:EOR93595.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter; K09686 antibiotic transport system permease protein rbh
Displaying items 1-30 of 176 in total

View Taxonomy