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scnpilot_solids1_trim150_scaffold_95

Search features with annotation key words

Displaying items 31-60 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_95_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25770..27350)
DNA (1581bp) protein (527aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DD2F5 rbh
scnpilot_solids1_trim150_scaffold_95_31
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27388..30186)
DNA (2799bp) protein (933aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:AEW01280.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AEW01280.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] rbh
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T6_NIAKG rbh
scnpilot_solids1_trim150_scaffold_95_32
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


30474..30704
DNA (231bp) protein (77aa)
30S ribosomal protein S20 n=1 Tax=Segetibacter koreensis RepID=UPI00037F19AB
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
scnpilot_solids1_trim150_scaffold_95_33
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30829..31941
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH82_CHIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD05473.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_95_34
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31947..33029
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH83_CHIPD rbh
Tat pathway signal protein {ECO:0000313|EMBL:KJF41830.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_95_35
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33110..34015)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JC32_9FLAO rbh
Contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21116.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_95_36
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34558..35415
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-P09 RepID=UPI00036F42FC
glucosyltransferase-S
Tax=CG_Delta_07
scnpilot_solids1_trim150_scaffold_95_37
unknown

Not on your lists

comp(35586..35996)
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_95_38
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36568..37203)
DNA (636bp) protein (212aa)
Deoxyadenosine kinase {ECO:0000313|EMBL:AEW01708.1}; EC=2.7.1.76 {ECO:0000313|EMBL:AEW01708.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Deoxyadenosine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH98_NIAKG rbh
deoxyadenosine kinase rbh
scnpilot_solids1_trim150_scaffold_95_39
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37302..38312)
DNA (1011bp) protein (337aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E4B0
scnpilot_solids1_trim150_scaffold_95_40
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38413..39909
DNA (1497bp) protein (499aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4] rbh
Aldehyde dehydrogenase (NADP(+)) {ECO:0000313|EMBL:AEV98916.1}; EC=1.2.1.4 {ECO:0000313|EMBL:AEV98916.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aldehyde dehydrogenase (NADP(+)) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT3_NIAKG rbh
scnpilot_solids1_trim150_scaffold_95_41
unknown

Not on your lists

comp(40170..40310)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_95_42
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40428..41264
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381A0D9 rbh
ATP/GTP-binding protein rbh
ATP/GTP-binding protein {ECO:0000313|EMBL:AEV98913.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_95_43
unknown

Not on your lists

41912..42283
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_95_44
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42312..42971)
DNA (660bp) protein (220aa)
Metallophosphoesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Z3_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW01337.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_95_45
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43081..43845)
DNA (765bp) protein (255aa)
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ2_NIAKG
Nucleotidyltransferase {ECO:0000313|EMBL:GAL86277.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
nucleotidyltransferase
scnpilot_solids1_trim150_scaffold_95_46
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43966..45417)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624EB1
Uncharacterized protein {ECO:0000313|EMBL:GAL86278.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_95_47
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45584..46489)
DNA (906bp) protein (302aa)
tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
tRNA dimethylallyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TED5_NIAKG rbh
scnpilot_solids1_trim150_scaffold_95_48
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46562..47131)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381B3EF
Uncharacterized protein {ECO:0000313|EMBL:GAO43451.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_95_49
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47223..48761)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374193C rbh
tRNA nucleotidyltransferase {ECO:0000313|EMBL:KIC93444.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
polynucleotide adenylyltransferase/metal dependent phosphohydrolase rbh
scnpilot_solids1_trim150_scaffold_95_50
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

48846..49133
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BVQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX55486.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
scnpilot_solids1_trim150_scaffold_95_51
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49215..49979)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C5FD8
Uncharacterized protein {ECO:0000313|EMBL:KIC89387.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_95_52
unknown

Not on your lists

comp(50025..50132)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_95_53
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50083..50439)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808869
Uncharacterized protein {ECO:0000313|EMBL:KIC89389.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_95_54
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50436..51353)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB01_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01348.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_95_55
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51346..52542)
DNA (1197bp) protein (399aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] rbh
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB02_NIAKG rbh
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KIC89391.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_95_56
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52653..52997)
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:AEW01350.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_95_57
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52994..53719)
DNA (726bp) protein (242aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB04_NIAKG
Membrane protein {ECO:0000313|EMBL:KIC89393.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
scnpilot_solids1_trim150_scaffold_95_58
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53959..55617)
DNA (1659bp) protein (553aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB05_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91975.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OmpA/MotB domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_95_59
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

55942..56763
DNA (822bp) protein (274aa)
Trans-hexaprenyltranstransferase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:AEW01353.1}; EC=2.5.1.30 {ECO:0000313|EMBL:AEW01353.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Trans-hexaprenyltranstransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB06_NIAKG
Displaying items 31-60 of 103 in total

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