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scnpilot_solids1_trim150_scaffold_95_56

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(52653..52997)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0 similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 114.0
  • Bit_score: 191
  • Evalue 4.50e-46
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 1.60e-45
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:AEW01350.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 6.90e-45

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGAGCAGATTAAGAAAACAATGGGGAGCAAATACTACCGCCAATGTAGTAGAAACGAAGAATGTGGTTGACATTAAGAATAAGACAGGTAATTTATATGAATCTATTGCTATTATTGGCAAAAGAGCTAACCAGATCAATATTGCTCTAAAAGAAGAACTCCATAATAAATTAGAAGAATTTGCCAGTCATACAGACAGCCTGGAAGAAATTCACGAAAATAAAGAACAGATAGAGATATCCAAGGCTTATGAAAGGATGCCTAACCCGGCATTACTGGCTACTCAGGAGTTTTTTGATGATAAGATTTATTATCGCAAAAGCGATAACGACCTGTTCAGTTAA
PROTEIN sequence
Length: 115
MSRLRKQWGANTTANVVETKNVVDIKNKTGNLYESIAIIGKRANQINIALKEELHNKLEEFASHTDSLEEIHENKEQIEISKAYERMPNPALLATQEFFDDKIYYRKSDNDLFS*