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scnpilot_solids1_trim150_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_151_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..758
DNA (756bp) protein (252aa)
Polysaccharide biosynthesis protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJS5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17043.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
polysaccharide biosynthesis protein
scnpilot_solids1_trim150_scaffold_151_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1011..2630
DNA (1620bp) protein (540aa)
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16] rbh
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-aspartate oxidase n=1 Tax=Segetibacter koreensis RepID=UPI00037A175A rbh
scnpilot_solids1_trim150_scaffold_151_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2839..3750
DNA (912bp) protein (304aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] rbh
Lipid A biosynthesis acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP9_NIAKG rbh
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEW02902.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_151_4
Micrococcus lylae, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3782..5455)
DNA (1674bp) protein (558aa)
MlyIR n=1 Tax=Micrococcus lylae RepID=Q93NZ2_9MICC
MlyIR {ECO:0000313|EMBL:AAK39546.1}; TaxID=1273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus lylae.;"
restriction endonuclease AlwI
scnpilot_solids1_trim150_scaffold_151_5
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5439..6449)
DNA (1011bp) protein (337aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
DNA methylase N-4/N-6 domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6P2_METEZ rbh
DNA methylase N-4/N-6 domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_151_6
unknown

Not on your lists

comp(6480..6620)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_151_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6773..9403
DNA (2631bp) protein (877aa)
Matrixin n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUP0_SOLCM rbh
Matrixin {ECO:0000313|EMBL:KIC93144.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Matrixin rbh
scnpilot_solids1_trim150_scaffold_151_8
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9560..9961)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382570D
DoxX family protein
Tax=RBG_13_Ignavibacteria_36_8_curated
scnpilot_solids1_trim150_scaffold_151_9
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10087..10782)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000369D62C
Uncharacterized protein {ECO:0000313|EMBL:EJF08964.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_151_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10886..11578)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF2_NIAKG rbh
two component transcriptional regulator, winged helix family rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEV97375.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_151_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11590..12882)
DNA (1293bp) protein (431aa)
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF3_NIAKG rbh
scnpilot_solids1_trim150_scaffold_151_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13003..13998)
DNA (996bp) protein (332aa)
Multidrug resistance protein RomA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEK9_CHIPD rbh
multidrug resistance protein RomA rbh
Multidrug resistance protein RomA {ECO:0000313|EMBL:ACU57831.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_151_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14069..15430)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003760939 rbh
NodT family RND efflux system outer membrane lipoprotein rbh
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACT95841.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_151_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15604..18777)
DNA (3174bp) protein (1058aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS12_CHIPD rbh
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACU60806.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_151_15
unknown

Not on your lists

18822..18989
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_151_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18984..20075)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A5D3C rbh
RND family efflux transporter MFP subunit; K03585 membrane fusion protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_151_17
unknown

Not on your lists

comp(20189..20635)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_151_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20853..21449)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG66_NIAKG
hypothetical protein; K08976 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02705.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_151_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21487..22185)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037142B5
Electron transporter SenC {ECO:0000313|EMBL:KIC91111.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
electron transport protein SCO1/SenC; K07152
scnpilot_solids1_trim150_scaffold_151_20
unknown

Not on your lists

comp(22206..22847)
DNA (642bp) protein (214aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_151_21
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23039..25270)
DNA (2232bp) protein (744aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037DDBB6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI49131.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_151_22
unknown

Not on your lists

25286..25402
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_151_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25486..28521
DNA (3036bp) protein (1012aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI7_NIAKG rbh
Amidohydrolase {ECO:0000313|EMBL:AEV96556.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
amidohydrolase rbh
scnpilot_solids1_trim150_scaffold_151_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28560..29867
DNA (1308bp) protein (436aa)
Amidohydrolase 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI8_NIAKG rbh
amidohydrolase rbh
Amidohydrolase 3 {ECO:0000313|EMBL:AEV96557.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_151_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29996..30637
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8A6_NIAKG
hypothetical protein; K03748 SanA protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99076.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_151_26
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30669..31568)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BAC5A rbh
AraC family transcriptional regulator
AraC protein arabinose-binding/dimerisation {ECO:0000313|EMBL:ACU04635.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_151_27
unknown

Not on your lists

comp(31552..31644)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_151_28
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31735..33225
DNA (1491bp) protein (497aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTA7_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU05685.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_151_29
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33365..36514
DNA (3150bp) protein (1050aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y047_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU04759.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_151_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36570..37997
DNA (1428bp) protein (476aa)
putative L-arabinose isomerase; K01804 L-arabinose isomerase [EC:5.3.1.4] rbh
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378C320 rbh
Displaying items 1-30 of 62 in total

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