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scnpilot_solids1_trim150_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_184_1
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..292
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:AKD03986.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids1_trim150_scaffold_184_2
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

411..1583
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037EF618
MDO-like protein
Acyltransferase 3 {ECO:0000313|EMBL:ABD80909.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
scnpilot_solids1_trim150_scaffold_184_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1746..4235
DNA (2490bp) protein (830aa)
replication restart DNA helicase PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] rbh
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Replication restart DNA helicase PriA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW5_NIAKG rbh
scnpilot_solids1_trim150_scaffold_184_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4248..5006
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000373C1E4 rbh
EcsC {ECO:0000313|EMBL:KIC89337.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_184_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5028..5318)
DNA (291bp) protein (97aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD82_NIAKG
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:AEV99322.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_184_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5367..7646
DNA (2280bp) protein (760aa)
Sodium/hydrogen exchanger n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM79_CHIPD rbh
sodium/hydrogen exchanger rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACU63984.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_184_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7936..8802
DNA (867bp) protein (289aa)
Transcription factor jumonji jmjC domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEM4_CHIPD rbh
transcription factor jumonji jmjC domain-containing protein rbh
Transcription factor jumonji jmjC domain protein {ECO:0000313|EMBL:ACU57846.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_184_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8820..9725)
DNA (906bp) protein (302aa)
Transglutaminase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T8_NIAKG rbh
transglutaminase domain-containing protein rbh
Transglutaminase domain protein {ECO:0000313|EMBL:AEV97941.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_184_9
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9945..10679
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2D4_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU05144.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_184_10
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10712..12091
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EK38_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM34144.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_184_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12282..12860
DNA (579bp) protein (193aa)
Lactate utilization protein B/C n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0N0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ23629.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein; K00782 hypothetical protein
scnpilot_solids1_trim150_scaffold_184_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12875..13780
DNA (906bp) protein (302aa)
Esterase/lipase-like protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK19_RUNSL
esterase/lipase-like protein
Esterase/lipase-like protein {ECO:0000313|EMBL:AEI49426.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_184_13
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13869..14450
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8B4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEQ30102.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
scnpilot_solids1_trim150_scaffold_184_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14567..15814
DNA (1248bp) protein (416aa)
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YE19_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC94053.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_184_15
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15947..19357
DNA (3411bp) protein (1137aa)
SusC/RagA family TonB-linked outer membrane protein id=4324626 bin=GWA2_Bacteroidetes_42_15 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
TonB-linked outer membrane protein SusC/RagA family rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_184_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19380..21176
DNA (1797bp) protein (599aa)
Uncharacterized protein id=4324627 bin=GWA2_Bacteroidetes_42_15 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
SusD family protein rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_184_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21209..22255
DNA (1047bp) protein (349aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7G4_9BACT rbh
Carbohydrate-binding CenC domain protein {ECO:0000313|EMBL:EDY17581.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_184_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22263..23345
DNA (1083bp) protein (361aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7G4_9BACT
Carbohydrate-binding CenC domain protein {ECO:0000313|EMBL:EDY17581.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_184_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

23352..24560
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003781A3C rbh
Uncharacterized protein {ECO:0000313|EMBL:AIE87591.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_184_20
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

24576..26069
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000366D438
uncharacterized protein wxcX-like
Tax=CG_Arma_01
scnpilot_solids1_trim150_scaffold_184_21
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26414..27013
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HTG8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58807.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_184_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27088..28248
DNA (1161bp) protein (387aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC39_NIAKG rbh
anti-FecI sigma factor FecR rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00346.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_184_23
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28531..31959
DNA (3429bp) protein (1143aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQR3_TANFA rbh
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AEW20880.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
TonB-linked outer membrane protein, SusC/RagA family rbh
scnpilot_solids1_trim150_scaffold_184_24
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32024..33742
DNA (1719bp) protein (573aa)
SusD family protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQR4_TANFA rbh
SusD family protein {ECO:0000313|EMBL:BAR52029.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SusD family protein rbh
scnpilot_solids1_trim150_scaffold_184_25
unknown

Not on your lists

33718..34761
DNA (1044bp) protein (348aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_184_26
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

34845..35813
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037178AC
Uncharacterized protein {ECO:0000313|EMBL:CDE85639.1}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_184_27
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35881..37014
DNA (1134bp) protein (378aa)
Lipolytic protein G-D-S-L family id=2140626 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
lysophospholipase L1-like esterase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_184_28
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37226..37756
DNA (531bp) protein (177aa)
Twin-arginine translocation pathway signal n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5C4_SPHS2
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ADZ79581.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_184_29
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37772..39487
DNA (1716bp) protein (572aa)
FAD dependent oxidoreductase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5C3_SPHS2 rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADZ79580.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_184_30
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39758..43291
DNA (3534bp) protein (1178aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000361A046 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21886.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
membrane-bound dehydrogenase domain-containing protein rbh
Displaying items 1-30 of 96 in total

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