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scnpilot_solids1_trim150_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_259_1
Helicobacter pylori, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

94..930
DNA (837bp) protein (279aa)
Type I R-M system specificity subunit {ECO:0000313|EMBL:EJB73033.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EJB73033.1};; TaxID=992055 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter pylori Hp A-16.;"
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Type I R-M system specificity subunit n=1 Tax=Helicobacter pylori Hp A-16 RepID=J0CGT0_HELPX
scnpilot_solids1_trim150_scaffold_259_2
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

932..1225
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003712D4F
Tax=RBG_16_Chloroflexi_52_11_curated
scnpilot_solids1_trim150_scaffold_259_3
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1235..1888
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DNA6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS68926.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_259_4
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1906..3246
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W0T6_DESIS rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM10468.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_259_5
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3239..5983
DNA (2745bp) protein (915aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F1BBC9 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM10467.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_259_6
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5980..9123
DNA (3144bp) protein (1048aa)
putative type I restriction-modification enzyme subunit R (EC:3.1.21.3) rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KFO67296.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
Type I site-specific deoxyribonuclease, HsdR family id=1965597 bin=GWE2_Bacteroidetes_42_39 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
scnpilot_solids1_trim150_scaffold_259_7
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

9125..9841
DNA (717bp) protein (239aa)
Putative uncharacterized protein id=3163005 bin=GWA2_Bacteroidetes_42_15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
hypothetical protein; K07043 rbh
Tax=GWF2_Planctomycetes_40_8_curated
scnpilot_solids1_trim150_scaffold_259_8
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

10154..10906
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BEK6_CHLPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABL64833.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
scnpilot_solids1_trim150_scaffold_259_9
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

10903..11994
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BEK7_CHLPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABL64834.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
scnpilot_solids1_trim150_scaffold_259_10
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12054..12317)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S510_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO92815.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
excisionase
scnpilot_solids1_trim150_scaffold_259_11
unknown

Not on your lists

12340..13041
DNA (702bp) protein (234aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_259_12
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13493..13843
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5E7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33169.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_259_13
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14399..15154)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ07_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU28763.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_259_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15377..15568
DNA (192bp) protein (64aa)
Putative uncharacterized protein id=4319041 bin=GWF2_Bacteroidetes_42_66 species=Croceibacter atlanticus genus=Croceibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_259_15
unknown

Not on your lists

15720..15917
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_259_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16036..16908)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003710E64 rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHQ24356.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_259_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17307..18365
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003792D03 rbh
LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEE48398.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_259_18
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18467..19774)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000363F726 rbh
Hexuronate transporter {ECO:0000313|EMBL:KHJ39357.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
major facilitator transporter rbh
scnpilot_solids1_trim150_scaffold_259_19
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(19783..20763)
DNA (981bp) protein (327aa)
Oxidoreductase domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4R2_9CLOT
Tax=CG_Arma_01
scnpilot_solids1_trim150_scaffold_259_20
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20815..22164)
DNA (1350bp) protein (450aa)
Oxidoreductase domain protein id=4724872 bin=GWC2_Bacteroidetes_40_22 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes rbh
oxidoreductase domain-containing protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_259_21
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22221..24554)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WRF0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR69309.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_259_22
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24604..25752)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000380458E rbh
Galactonate dehydratase {ECO:0000313|EMBL:KIL39719.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
L-alanine-DL-glutamate epimerase-like protein rbh
scnpilot_solids1_trim150_scaffold_259_23
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25848..26591)
DNA (744bp) protein (248aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KHJ39355.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KHJ39355.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C4641 rbh
scnpilot_solids1_trim150_scaffold_259_24
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

26920..28533
DNA (1614bp) protein (538aa)
membrane-bound dehydrogenase domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A0AAF
nicotinamidase-like amidase rbh
Tax=RBG_13_Planctomycetes_50_24_curated
scnpilot_solids1_trim150_scaffold_259_25
unknown

Not on your lists

28496..28657
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_259_26
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28922..31441
DNA (2520bp) protein (840aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ20309.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Putative uncharacterized protein id=4709851 bin=GWA2_Bacteroidetes_A19_40_15 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes rbh
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_259_27
unknown

Not on your lists

31641..31868
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_259_28
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32059..34422
DNA (2364bp) protein (788aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJB9_RUNSL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI50413.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_259_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34972..37257
DNA (2286bp) protein (762aa)
TonB-dependent receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRA6_CHIPD rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACU64345.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_259_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37421..38647
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7Q1_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW03345.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 36 in total

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