ggKbase home page

scnpilot_solids1_trim150_scaffold_291

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_291_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_2
unknown

Not on your lists

575..1039
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_3
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1105..2199
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366EF21
hypothetical protein
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_solids1_trim150_scaffold_291_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

2359..2802
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=4035625 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
scnpilot_solids1_trim150_scaffold_291_5
unknown

Not on your lists

comp(3332..3439)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3512..4123)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E72B9
Uncharacterized protein {ECO:0000313|EMBL:AHM58702.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_291_7
unknown

Not on your lists

comp(4214..4465)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_8
unknown

Not on your lists

4517..4654
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_9
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5441..6388)
DNA (948bp) protein (316aa)
Transcriptional regulator, AraC family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S687_PEDSD
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM58699.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_291_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6722..7660
DNA (939bp) protein (313aa)
Phospholipase/Carboxylesterase id=5024964 bin=GWA2_Bacteroidetes_42_15 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
phospholipase/Carboxylesterase; K03932 polyhydroxybutyrate depolymerase rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_291_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7687..8517)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003663EA9 rbh
G-D-S-L family lipolytic protein rbh
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AEI52228.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_291_12
unknown

Not on your lists

comp(8664..8909)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_13
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9026..9250)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003480509
Uncharacterized protein {ECO:0000313|EMBL:EJG00609.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_291_14
unknown

Not on your lists

10045..10200
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_291_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10207..12453
DNA (2247bp) protein (749aa)
TonB-dependent receptor n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR8_RUNSL rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:AEI51959.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_291_16
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12516..13082
DNA (567bp) protein (189aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR6_RUNSL
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AEI51957.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_291_17
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13125..13472
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51956.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_291_18
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13459..17328
DNA (3870bp) protein (1290aa)
Magnesium chelatase {ECO:0000313|EMBL:AEI51955.1}; EC=6.6.1.1 {ECO:0000313|EMBL:AEI51955.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Magnesium chelatase (EC:6.6.1.1); K02230 cobaltochelatase CobN [EC:6.6.1.2] rbh
Magnesium chelatase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR4_RUNSL rbh
scnpilot_solids1_trim150_scaffold_291_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17561..19714)
DNA (2154bp) protein (718aa)
cytochrome C n=1 Tax=Dyadobacter beijingensis RepID=UPI0003806EA3 rbh
cytochrome C rbh
Planctomycete cytochrome C {ECO:0000313|EMBL:ACT93199.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_291_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19839..21293)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW68_DYAFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT93200.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_291_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21472..23796)
DNA (2325bp) protein (775aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW69_DYAFD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT93201.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_291_22
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24108..26933)
DNA (2826bp) protein (942aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40] rbh
Alpha-L-rhamnosidase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEP1_9SPHI rbh
Tax=RBG_16_Planctomycetes_64_12_curated
scnpilot_solids1_trim150_scaffold_291_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27082..28629)
DNA (1548bp) protein (516aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN6_DYAFD rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACT93514.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_291_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28653..31736)
DNA (3084bp) protein (1028aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN5_DYAFD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT93513.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_291_25
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31939..32757)
DNA (819bp) protein (273aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Uncharacterized protein {ECO:0000313|EMBL:CDX33903.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
scnpilot_solids1_trim150_scaffold_291_26
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32763..33515)
DNA (753bp) protein (251aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Uncharacterized protein {ECO:0000313|EMBL:ERP86128.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
alpha-dehydro-beta-deoxy-D-glucarate aldolase
scnpilot_solids1_trim150_scaffold_291_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(33512..34372)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DB57E
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_291_28
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34372..35169)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003645ED5
Uncharacterized protein {ECO:0000313|EMBL:EJS65750.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-1.;"
Short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_291_29
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(35244..36941)
DNA (1698bp) protein (566aa)
Alpha-L-rhamnosidase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU7_9BACT rbh
alpha-L-rhamnosidase family protein rbh
Tax=RBG_16_Planctomycetes_64_10_curated
scnpilot_solids1_trim150_scaffold_291_30
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36982..38457)
DNA (1476bp) protein (492aa)
Aldehyde Dehydrogenase; K07248 lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] rbh
Aldehyde dehydrogenase A, NAD-linked n=1 Tax=unidentified eubacterium SCB49 RepID=A6EN91_9BACT rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJD36003.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
Displaying items 1-30 of 40 in total

View Taxonomy