ggKbase home page

scnpilot_solids1_trim150_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_299_1
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)
Transposase IS4 family protein id=4361163 bin=GWF2_Bacteroidetes_41_9 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
transposase IS4 family protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_299_2
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(234..551)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBH2_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77420.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_299_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(570..1340)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBH2_SPHS2
ABC transporter permease {ECO:0000313|EMBL:KIC96016.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_299_4
unknown

Not on your lists

comp(1410..1529)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_5
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1541..4000)
DNA (2460bp) protein (820aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036448A9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF31540.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
protein of unknown function DUF214 rbh
scnpilot_solids1_trim150_scaffold_299_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4251..6656)
DNA (2406bp) protein (802aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPJ5_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV97816.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_299_7
unknown

Not on your lists

comp(6731..6928)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7245..9617)
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLP5_CHIPD rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAO44886.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_299_9
unknown

Not on your lists

comp(9598..9873)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10002..12428)
DNA (2427bp) protein (809aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSU3_SOLCM rbh
lipoprotein release ABC transporter permease rbh
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AFD05403.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_299_11
unknown

Not on your lists

comp(12438..12611)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12608..14995)
DNA (2388bp) protein (796aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003660738 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91292.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_299_13
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15176..17584)
DNA (2409bp) protein (803aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360881D rbh
hypothetical protein; K02004 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI48367.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_299_14
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17832..20231)
DNA (2400bp) protein (800aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Galbibacter marinus RepID=K2PPX8_9FLAO rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EKF54615.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
antimicrobial peptide ABC transporter permease rbh
scnpilot_solids1_trim150_scaffold_299_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20459..22891)
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAJ4_RUNSL rbh
Cell division protein FtsX {ECO:0000313|EMBL:KIC93641.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_299_16
unknown

Not on your lists

comp(22991..23206)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23361..24038)
DNA (678bp) protein (226aa)
Phosphonate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKC4_NIAKG rbh
phosphonate-transporting ATPase; K02003 putative ABC transport system ATP-binding protein rbh
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC90118.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_299_18
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24190..24549
DNA (360bp) protein (120aa)
S23 ribosomal protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L102_HALH1
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:AEE51589.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_299_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24567..25817)
DNA (1251bp) protein (417aa)
transporter n=1 Tax=Segetibacter koreensis RepID=UPI000381D427
Transporter {ECO:0000313|EMBL:KIC93645.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
scnpilot_solids1_trim150_scaffold_299_20
unknown

Not on your lists

25923..26054
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_21
unknown

Not on your lists

26066..26218
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_22
unknown

Not on your lists

26172..26267
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_299_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26477..27550
DNA (1074bp) protein (358aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS4_NIAKG rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV98907.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_299_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27550..30639
DNA (3090bp) protein (1030aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS5_NIAKG rbh
Acriflavin resistance protein {ECO:0000313|EMBL:KIC89941.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
scnpilot_solids1_trim150_scaffold_299_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30646..31968
DNA (1323bp) protein (441aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS6_NIAKG rbh
Putative RND-type efflux pump outer membrane protein {ECO:0000313|EMBL:GAO44455.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane efflux protein rbh
scnpilot_solids1_trim150_scaffold_299_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32000..32533)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF57_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02677.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_299_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32699..33829)
DNA (1131bp) protein (377aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP9_NIAKG rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV96783.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_299_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33835..38193)
DNA (4359bp) protein (1453aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP8_NIAKG rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AEV96782.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
scnpilot_solids1_trim150_scaffold_299_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38237..38626)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96781.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_299_30
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38848..39351
DNA (504bp) protein (168aa)
OsmC-like protein n=2 Tax=Leptospira licerasiae RepID=I0XPB9_9LEPT
Peroxiredoxin {ECO:0000313|EMBL:KFC57790.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
OsmC family protein
Displaying items 1-30 of 37 in total

View Taxonomy