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scnpilot_solids1_trim150_scaffold_507

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_507_1
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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comp(28..513)
DNA (486bp) protein (162aa)
type I restriction-modification enzyme subunit S; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction modification system DNA specificity domain protein id=1907462 bin=GWE2_Bacteroidetes_29_8 species=Bacteroides helcogenes genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids1_trim150_scaffold_507_2
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(507..2954)
DNA (2448bp) protein (816aa)
Type I restriction-modification system, M subunit n=1 Tax=sediment metagenome RepID=D9PK00_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFO67293.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
type I restriction system adenine methylase HsdM
scnpilot_solids1_trim150_scaffold_507_3
unknown

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comp(3330..4214)
DNA (885bp) protein (295aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_507_4
Dokdonia donghaensis, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4336..4605)
DNA (270bp) protein (90aa)
Putative DNA-binding protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TKN6_MARTH
Transcriptional regulator {ECO:0000313|EMBL:KGO06010.1}; TaxID=1300343 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia donghaensis DSW-1.;"
DNA-binding protein
scnpilot_solids1_trim150_scaffold_507_5
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4784..6028)
DNA (1245bp) protein (415aa)
Probable transposase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XTR9_FLAIG rbh
hypothetical protein rbh
Probable transposase {ECO:0000313|EMBL:CCG53649.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_solids1_trim150_scaffold_507_trna_2
unknown

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comp(6276..6360)
DNA (85bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_507_6
unknown

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6680..6997
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_507_trna_1
unknown

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comp(7391..7464)
DNA (74bp)
transferRNA Arg
scnpilot_solids1_trim150_scaffold_507_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7639..9546)
DNA (1908bp) protein (636aa)
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AEW00243.1}; EC=3.5.99.6 {ECO:0000313|EMBL:AEW00243.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] rbh
Glucosamine-6-phosphate deaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q0_NIAKG rbh
scnpilot_solids1_trim150_scaffold_507_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9743..10483
DNA (741bp) protein (247aa)
Membrane or secreted protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C253_SPHS2
hypothetical protein
Membrane or secreted protein {ECO:0000313|EMBL:ADZ79703.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_507_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10896..11954)
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACT94052.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACT94052.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Transcriptional regulator, LacI family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4F1_DYAFD
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids1_trim150_scaffold_507_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12032..13438
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036D9E22 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF15607.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_507_11
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13790..14620
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C919_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77208.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_507_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14688..16112
DNA (1425bp) protein (475aa)
Oxidoreductase domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBD9_SPILD rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ADB36121.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids1_trim150_scaffold_507_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16391..17677
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CBFF7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36122.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids1_trim150_scaffold_507_14
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17817..18578
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FXV3_ECHVK rbh
dehydrogenase rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA78117.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids1_trim150_scaffold_507_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19072..22233
DNA (3162bp) protein (1054aa)
collagen-binding protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003620B7D rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT96864.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_507_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22324..24150
DNA (1827bp) protein (609aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W059_DYAFD rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACT95386.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_507_17
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24343..25656)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D884 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHW59279.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
glucosyl hydrolase family protein
scnpilot_solids1_trim150_scaffold_507_18
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25865..27043
DNA (1179bp) protein (393aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
d-mannonate dehydratase (EC:4.2.1.8); K01686 mannonate dehydratase [EC:4.2.1.8]
Mannonate dehydratase n=1 Tax=Flavobacterium sp. CF136 RepID=J2S4U0_9FLAO
scnpilot_solids1_trim150_scaffold_507_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27416..29011
DNA (1596bp) protein (532aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UPF0747 protein Niako_2572 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS9_NIAKG rbh
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_507_20
unknown

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29286..29393
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_507_21
unknown

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comp(29379..29639)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_507_22
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29806..30564)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68830.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Displaying 24 items

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