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scnpilot_solids1_trim150_scaffold_705

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_705_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3..554
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000369BCB4
SSS sodium solute transporter superfamily protein; K03307 solute:Na+ symporter, SSS family
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACT96886.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_705_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

592..1581
DNA (990bp) protein (330aa)
ketose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] rbh
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:ACT96885.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACT96885.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Ketose-bisphosphate aldolase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXY4_DYAFD rbh
scnpilot_solids1_trim150_scaffold_705_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1802..3664
DNA (1863bp) protein (621aa)
thiamine pyrophosphate protein; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-] rbh
Thiamine pyrophosphate protein central region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXY3_DYAFD rbh
Thiamine pyrophosphate protein central region {ECO:0000313|EMBL:ACT96884.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_705_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3669..4571
DNA (903bp) protein (301aa)
xylose isomerase domain-containing protein; K03335 inosose dehydratase [EC:4.2.1.44] rbh
Xylose isomerase domain protein TIM barrel n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWY3_DYAFD rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT96883.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_705_5
unknown

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4792..5223
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_705_6
unknown

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5220..5378
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_705_7
unknown

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5499..6065
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003633383
scnpilot_solids1_trim150_scaffold_705_8
unknown

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6425..6583
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_705_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6830..8203
DNA (1374bp) protein (458aa)
oxidoreductase n=1 Tax=Rudanella lutea RepID=UPI00037EEF90 rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AEE48650.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_705_10
unknown

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comp(8222..8860)
DNA (639bp) protein (213aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_705_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9151..9885)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368716E
Methyltransferase type 11 {ECO:0000313|EMBL:AKD03670.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
type 11 methyltransferase
scnpilot_solids1_trim150_scaffold_705_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9916..10575)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F7FEB0
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEA44997.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids1_trim150_scaffold_705_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10622..11503
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0D6_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28185.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_705_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11481..11864
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIF2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63714.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_705_15
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12111..13493)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000381FBC0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWH13631.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_705_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13511..14623)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D192E rbh
NHL repeat containing protein rbh
NHL repeat containing protein {ECO:0000313|EMBL:AEE50240.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_705_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14643..16109)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJX4_SPILD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37096.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids1_trim150_scaffold_705_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16133..19333)
DNA (3201bp) protein (1067aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJX5_SPILD rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37097.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_705_19
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19649..20926
DNA (1278bp) protein (426aa)
Probable acetyl xylan esterase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C832_9PLAN rbh
Probable acetyl xylan esterase {ECO:0000313|EMBL:EDL59057.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_705_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21094..22116
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003705067 rbh
Dehydrogenase {ECO:0000313|EMBL:AKD05368.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
oxidoreductase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_705_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22231..23574
DNA (1344bp) protein (448aa)
Alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:KHJ36738.1}; EC=3.2.1.49 {ECO:0000313|EMBL:KHJ36738.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
NADH-dependent dehydrogenase n=1 Tax=Spirosoma spitsbergense RepID=UPI0003769358 rbh
oxidoreductase domain-containing protein rbh
Displaying 21 items

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