ggKbase home page

scnpilot_solids1_trim150_scaffold_1180

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1180_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1180_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(396..659)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93912.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1180_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(936..1697)
DNA (762bp) protein (254aa)
DNA mistmatch repair protein MutT n=1 Tax=Cytophagales str. B6 RepID=UPI0003B32F95 rbh
NUDIX hydrolase {ECO:0000313|EMBL:EHQ28212.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
NUDIX hydrolase rbh
scnpilot_solids1_trim150_scaffold_1180_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1781..2449
DNA (669bp) protein (223aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FZL4_ECHVK
Putative hydrolase {ECO:0000313|EMBL:GAO42454.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
haloacid dehalogenase superfamily protein
scnpilot_solids1_trim150_scaffold_1180_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2863..6084
DNA (3222bp) protein (1074aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000382E038 rbh
Collagen-binding protein {ECO:0000313|EMBL:KIC91126.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_1180_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6107..7972
DNA (1866bp) protein (622aa)
RagB/SusD domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Z1_NIAKG rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KIC91127.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RagB/SusD domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1180_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8073..11429
DNA (3357bp) protein (1119aa)
ASPIC/UnbV domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTG6_9SPHI rbh
RNA-binding protein {ECO:0000313|EMBL:AHF16125.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ASPIC/UnbV domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1180_8
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11537..12850
DNA (1314bp) protein (438aa)
Vanadium-dependent haloperoxidase family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Z3_NIAKG rbh
PAP2 superfamily protein {ECO:0000313|EMBL:AHM60879.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
vanadium-dependent haloperoxidase family protein rbh
scnpilot_solids1_trim150_scaffold_1180_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13035..14312
DNA (1278bp) protein (426aa)
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI00038020A2 rbh
Oxidoreductase {ECO:0000313|EMBL:KIC89631.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
oxidoreductase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_1180_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14439..15281
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G1_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04873.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Displaying 10 items

View Taxonomy