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scnpilot_solids1_trim150_scaffold_21_135

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(150960..151898)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 302.0
  • Bit_score: 560
  • Evalue 1.40e-156
rlu; pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 305.0
  • Bit_score: 532
  • Evalue 9.10e-149
  • rbh
RNA pseudouridine synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F1F526 similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 302.0
  • Bit_score: 548
  • Evalue 5.10e-153
  • rbh

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGGCCTCCTCGCGCAGCCTGCCCGTGCCGGACGGGCTGGAAGGCTCCCGCGTCGACGCCGCCTTGGCGAAGATGCTGGGCTTCTCCCGCACCTTCGCCGCCGAGGTGGCGGAGGCGGGCGGCGTCGTGCTGGACGGCGCGGTGCTCGGCAAGTCCGATCGGCTGCGCGCCGGCGGCTGGCTCGAGGTCACCTGGACGCCGAAGCAGGAGCCGCGGGTCGTGCCCATCGCCGTCCCGGAACTGGGGATCGTCTACGACGACGACGACATCGTGGTGGTGGACAAGCCCACCGGCGTCGCCGCGCATCCGTCGGTCGGCTGGGAGGGTCCCACGGTGGTCGGGGCCCTGGCCGCGGCCGGGTTCCGCATCGCCACCAGCGGCGCCGCCGAACGGCAGGGCGTGGTGCACCGGCTGGATGTCGGCACCAGCGGTCTGATGGTGGTCGCCAAGACCGAGCAGGCGTACACCGTGCTCAAGCGCGCCTTCAAGGAGCGCACGGTGCAGAAGATCTACCACGCGGTCGTGCAGGGGCATCCCGATCCGCTCGCCGGCACGATCGACGCGCCGATCGGGCGGCATCCGCACCATCATTGGAAGTTCGCGGTCGTCGCCGACGGCAAGCCCTCGGTGACCCACTACGAGACGCTCGAGGCGTTCCCGCGCGCGTCGCTGCTCGAGATCCACCTCGAGACCGGGCGCACGCACCAGATCCGCGTGCACATGGCGGCCCACCGGCATCCGTGCGTCGGCGACCCGCTGTACGGCGCGGACCCCACGCTCTCAGAACGGCTGGGGCTCACCAGGCAGTGGCTGCACGCCCACCGGCTGGCGTTCACACACCCGACGACGGGGGAGTGGGTGAGCTTCGAATCGCCGTATCCCGCGGACTTCGTGCACGCCCTCGACGTGCTCGATCCCGGGCGCTCCTCGGCGGACTGA
PROTEIN sequence
Length: 313
VASSRSLPVPDGLEGSRVDAALAKMLGFSRTFAAEVAEAGGVVLDGAVLGKSDRLRAGGWLEVTWTPKQEPRVVPIAVPELGIVYDDDDIVVVDKPTGVAAHPSVGWEGPTVVGALAAAGFRIATSGAAERQGVVHRLDVGTSGLMVVAKTEQAYTVLKRAFKERTVQKIYHAVVQGHPDPLAGTIDAPIGRHPHHHWKFAVVADGKPSVTHYETLEAFPRASLLEIHLETGRTHQIRVHMAAHRHPCVGDPLYGADPTLSERLGLTRQWLHAHRLAFTHPTTGEWVSFESPYPADFVHALDVLDPGRSSAD*