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scnpilot_solids1_trim150_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_21_1
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

797..1351
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5C6T0_MICLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS31418.1}; TaxID=465515 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC; 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus; lysodeikticus).;"
scnpilot_solids1_trim150_scaffold_21_2
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1903..2148)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJK0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74903.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids1_trim150_scaffold_21_trna_4
unknown

Not on your lists

comp(2355..2427)
DNA (73bp)
transferRNA Asn
scnpilot_solids1_trim150_scaffold_21_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2517..3284)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F9A826 rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KDA06217.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
oligopeptide ABC transporter ATPase
scnpilot_solids1_trim150_scaffold_21_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3319..5178)
DNA (1860bp) protein (620aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346C792 rbh
scnpilot_solids1_trim150_scaffold_21_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5178..6542)
DNA (1365bp) protein (455aa)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KJL19023.1}; EC=3.1.5.1 {ECO:0000313|EMBL:KJL19023.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dgt; dGTP triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D63222 rbh
scnpilot_solids1_trim150_scaffold_21_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6532..7710)
DNA (1179bp) protein (393aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
tRNA-dihydrouridine synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVE3_9MICO rbh
nifR3; tRNA-dihydrouridine synthase
scnpilot_solids1_trim150_scaffold_21_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7771..8265
DNA (495bp) protein (165aa)
putative peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B4032
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_21_8
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8301..8975)
DNA (675bp) protein (225aa)
DSBA oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002FCBA0B rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EQM83987.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
dithiol-disulfide isomerase
scnpilot_solids1_trim150_scaffold_21_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9294..10787
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR13_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ53229.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_10
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11414..12259
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348A474
Uncharacterized protein {ECO:0000313|EMBL:KJQ54920.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
conserved secreted protein
scnpilot_solids1_trim150_scaffold_21_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12319..13125)
DNA (807bp) protein (269aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
uppS; undecaprenyl pyrophosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] rbh
UDP pyrophosphate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000314C6BC rbh
scnpilot_solids1_trim150_scaffold_21_12
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13122..13841)
DNA (720bp) protein (240aa)
DNA repair protein RecO n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVE0_9MICO
recO; recombinational DNA repair protein; K03584 DNA repair protein RecO (recombination protein O)
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_13
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13869..14588
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036BACC8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ55546.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_21_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14578..16332)
DNA (1755bp) protein (585aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leuA; isopropylmalate/homocitrate/citramalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] rbh
2-isopropylmalate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000311A243 rbh
scnpilot_solids1_trim150_scaffold_21_15
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16508..17455)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034637B2 rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94194.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
alcohol dehydrogenase GroES domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_21_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17457..18377)
DNA (921bp) protein (307aa)
GTPase Era n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037DCA47 rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
era; GTPase; K03595 GTP-binding protein Era rbh
scnpilot_solids1_trim150_scaffold_21_17
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18343..19629)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003499A09 rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94199.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hemolysins rbh
scnpilot_solids1_trim150_scaffold_21_18
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19626..20084)
DNA (459bp) protein (153aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Endoribonuclease YbeY n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KY98_9MICO
metal-dependent hydrolase; K07042 probable rRNA maturation factor
scnpilot_solids1_trim150_scaffold_21_19
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20081..21202)
DNA (1122bp) protein (374aa)
Phosphate starvation protein PhoH n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR3_9MICO rbh
Phosphate starvation protein PhoH {ECO:0000313|EMBL:EQM83913.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
phoH; phosphate starvation-inducible protein PhoH, ATPase; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
scnpilot_solids1_trim150_scaffold_21_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21192..21539)
DNA (348bp) protein (116aa)
HIT-like protein {ECO:0000313|EMBL:KJL36075.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL36075.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
HIT family hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI0002D3A795
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
scnpilot_solids1_trim150_scaffold_21_21
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21554..22282)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496CBE rbh
scnpilot_solids1_trim150_scaffold_21_22
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22299..23411)
DNA (1113bp) protein (371aa)
molecular chaperone DnaJ n=1 Tax=Microbacterium barkeri RepID=UPI0003661CEA rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain; K03686 molecular chaperone DnaJ rbh
scnpilot_solids1_trim150_scaffold_21_23
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23434..24474)
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW49_9MICO rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator of heat shock gene; K03705 heat-inducible transcriptional repressor rbh
scnpilot_solids1_trim150_scaffold_21_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24527..25759)
DNA (1233bp) protein (411aa)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:KJL19755.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KJL19755.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0C7_9MICO rbh
scnpilot_solids1_trim150_scaffold_21_25
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25759..26379)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVC2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA06231.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26461..28308)
DNA (1848bp) protein (616aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
elongation factor 4 n=1 Tax=Microbacterium barkeri RepID=UPI0002E5A1EC rbh
lepA; membrane GTPase LepA; K03596 GTP-binding protein LepA rbh
scnpilot_solids1_trim150_scaffold_21_27
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28578..29546
DNA (969bp) protein (323aa)
ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F873 rbh
ABC transporter permease {ECO:0000313|EMBL:EYT58989.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K02033 peptide/nickel transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_21_28
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29548..30480
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003085301 rbh
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:KJL19760.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
oppC; oligopeptide transport system permease; K02034 peptide/nickel transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_21_29
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30477..32420
DNA (1944bp) protein (648aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJQ55526.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55526.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L089_9MICO rbh
ABC transporter ATPase rbh
Displaying items 1-30 of 199 in total

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