ggKbase home page

scnpilot_solids1_trim150_scaffold_21

Search features with annotation key words

Displaying items 31-60 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_21_30
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32572..34287
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVA6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM83959.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
oppA; extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_21_31
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34331..35092
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000300C3D2 rbh
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:KJQ55524.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hydrolase or acyltransferase rbh
scnpilot_solids1_trim150_scaffold_21_32
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35043..36278)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003448E30 rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJQ55523.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
permease of the major facilitator superfamily
scnpilot_solids1_trim150_scaffold_21_33
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(36275..37597)
DNA (1323bp) protein (441aa)
beta-galactosidase (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000307B19F rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_34
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


37822..38082
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L073_9MICO
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
30S ribosomal protein S20
scnpilot_solids1_trim150_scaffold_21_35
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38160..39182)
DNA (1023bp) protein (341aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] rbh
DNA polymerase III subunit delta n=1 Tax=Microbacterium barkeri RepID=UPI00037C019D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL27669.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_21_36
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(39214..41496)
DNA (2283bp) protein (761aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E8F27F rbh
membrane metal-binding protein; K02238 competence protein ComEC rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_37
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41493..42122)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C2742
Competence protein ComEA {ECO:0000313|EMBL:EYT58979.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
DNA uptake protein; K02237 competence protein ComEA
scnpilot_solids1_trim150_scaffold_21_38
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(42243..44735)
DNA (2493bp) protein (831aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] rbh
leucyl-tRNA synthetase n=1 Tax=Microbacterium barkeri RepID=UPI00036C0E20 rbh
scnpilot_solids1_trim150_scaffold_21_39
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44834..46180)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L068_9MICO
Metal ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDA06243.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
anthranilate/para-aminobenzoate synthase component I rbh
scnpilot_solids1_trim150_scaffold_21_40
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46184..46840
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KV86_9MICO rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94222.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_41
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46854..47882
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D40B83 rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94223.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_21_42
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47879..48724
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW10_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ55511.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_21_43
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48755..49927)
DNA (1173bp) protein (391aa)
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003054E6B rbh
Putative lipoprotein YbbD {ECO:0000313|EMBL:KJL20118.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
scnpilot_solids1_trim150_scaffold_21_44
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49938..51023)
DNA (1086bp) protein (362aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000376F5FB rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94229.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_solids1_trim150_scaffold_21_45
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51146..52282
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Nocardiopsis kunsanensis RepID=UPI00034CBCA4 rbh
sodium/calcium exchanger family protein rbh
Sodium/calcium exchanger family protein {ECO:0000313|EMBL:AFR10775.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
scnpilot_solids1_trim150_scaffold_21_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52303..52638)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAR2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96553.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_21_47
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52699..53379)
DNA (681bp) protein (227aa)
ABC transporter n=1 Tax=Promicromonospora sukumoe RepID=UPI0003751723
ABC transporter ATP-binding protein YtrE {ECO:0000313|EMBL:KJL32781.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_21_48
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53376..54269)
DNA (894bp) protein (298aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000313|EMBL:KJL32780.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL32780.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
sulfate-transporting ATPase (EC:3.6.3.25) rbh
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000366018A rbh
scnpilot_solids1_trim150_scaffold_21_49
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54288..56966)
DNA (2679bp) protein (893aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000310E87B rbh
FtsX-like permease family protein {ECO:0000313|EMBL:KJL32779.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_21_50
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56963..59299)
DNA (2337bp) protein (779aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3B5_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KJL32778.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_51
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59371..60618)
DNA (1248bp) protein (416aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
arcA3; Arginine deiminase (EC:3.5.3.6) rbh
arginine deiminase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037FAF02 rbh
scnpilot_solids1_trim150_scaffold_21_trna_3
unknown

Not on your lists

comp(60704..60776)
DNA (73bp)
transferRNA Ala
scnpilot_solids1_trim150_scaffold_21_52
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60877..61254)
DNA (378bp) protein (126aa)
iojap family protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003473FD9
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K09710 ribosome-associated protein
scnpilot_solids1_trim150_scaffold_21_53
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(61254..62471)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345EB4D
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_54
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62468..63070)
DNA (603bp) protein (201aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] rbh
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI000317C100 rbh
scnpilot_solids1_trim150_scaffold_21_55
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(63075..63284)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347867B
4-hydroxybenzoate polyprenyltransferase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_56
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63334..64611)
DNA (1278bp) protein (426aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003155D5C rbh
scnpilot_solids1_trim150_scaffold_21_57
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64666..65454)
DNA (789bp) protein (263aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
proB; glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000304B4E3 rbh
scnpilot_solids1_trim150_scaffold_21_58
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(65451..66950)
DNA (1500bp) protein (500aa)
GTPase CgtA n=1 Tax=Microbacterium barkeri RepID=UPI0002DC4C68 rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
obgE; GTPase; K03979 GTP-binding protein rbh
Displaying items 31-60 of 199 in total

View Taxonomy