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scnpilot_solids1_trim150_scaffold_21

Search features with annotation key words

Displaying items 61-90 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_21_59
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(67047..67304)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YJ65_9MICO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rpmA; ribosomal protein L27; K02899 large subunit ribosomal protein L27
scnpilot_solids1_trim150_scaffold_21_60
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(67325..67633)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Microbacterium barkeri RepID=UPI0002D3CFC7
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
rplU; ribosomal protein L21; K02888 large subunit ribosomal protein L21
scnpilot_solids1_trim150_scaffold_21_61
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67845..68111
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D2F587
Uncharacterized protein {ECO:0000313|EMBL:KJL17396.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_62
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68076..70379)
DNA (2304bp) protein (768aa)
rng; ribonuclease G and E; K08300 ribonuclease E [EC:3.1.26.12] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L030_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM83915.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids1_trim150_scaffold_21_63
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70648..71256
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000309E422
Vitamin K epoxide reductase family protein {ECO:0000313|EMBL:KJL32702.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_64
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71329..71745)
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
nucleoside diphosphate kinase n=1 Tax=Microbacterium barkeri RepID=UPI0003099015
scnpilot_solids1_trim150_scaffold_21_65
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71735..72163)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003457FF9
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94246.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
allophanate hydrolase subunit 2
scnpilot_solids1_trim150_scaffold_21_66
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72151..73503)
DNA (1353bp) protein (451aa)
Folylpolyglutamate synthase {ECO:0000313|EMBL:KJL27633.1}; EC=6.3.2.17 {ECO:0000313|EMBL:KJL27633.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
folylpolyglutamate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] rbh
folylpolyglutamate synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002DADFB3 rbh
scnpilot_solids1_trim150_scaffold_21_67
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(73500..76826)
DNA (3327bp) protein (1109aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] rbh
isoleucyl-tRNA synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003484AAC rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_68
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77162..78001)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D43180 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL27631.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
superfamily I DNA and RNA helicase and helicase subunits
scnpilot_solids1_trim150_scaffold_21_69
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78231..78881
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A5134
Uncharacterized protein {ECO:0000313|EMBL:EYT58950.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
low-complexity protein
scnpilot_solids1_trim150_scaffold_21_70
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79008..80492)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003481B5C rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT58949.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_21_71
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80489..81292)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003776C50 rbh
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:KJQ54961.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_21_72
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81289..82266)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D244C rbh
ABC transporter permease {ECO:0000313|EMBL:KDA06269.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_21_73
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82274..83908)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E9B10D rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDA06270.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
dipeptide ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_21_74
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


84076..86649
DNA (2574bp) protein (858aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
valyl-tRNA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037DD881 rbh
scnpilot_solids1_trim150_scaffold_21_75
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86649..86864
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KXX3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL27624.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_21_76
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86877..87461)
DNA (585bp) protein (195aa)
Putative TetR family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XN34_MICPN
putative TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAK36484.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_21_77
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87555..88994
DNA (1440bp) protein (480aa)
Putative drug resistance transporter n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XN33_MICPN rbh
putative drug resistance transporter rbh
Putative drug resistance transporter {ECO:0000313|EMBL:BAK36483.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_21_78
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89020..89238)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BC563
Uncharacterized protein {ECO:0000313|EMBL:EYT59733.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_21_79
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(89241..89849)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349506B
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_80
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90044..91222)
DNA (1179bp) protein (393aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
kbl; 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] rbh
2-amino-3-ketobutyrate CoA ligase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K154_9MICO rbh
scnpilot_solids1_trim150_scaffold_21_81
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91234..92277)
DNA (1044bp) protein (348aa)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:EYT58941.1}; EC=1.1.1.103 {ECO:0000313|EMBL:EYT58941.1};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] rbh
L-threonine 3-dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A26B1 rbh
scnpilot_solids1_trim150_scaffold_21_82
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92366..93292
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFG8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM72930.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
putative LysR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_21_83
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93302..95353
DNA (2052bp) protein (684aa)
Peptidyl-dipeptidase dcp {ECO:0000313|EMBL:KJQ54956.1}; EC=3.4.15.5 {ECO:0000313|EMBL:KJQ54956.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Zn-dependent oligopeptidase; K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C271E rbh
scnpilot_solids1_trim150_scaffold_21_84
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95346..95981
DNA (636bp) protein (212aa)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P871_LEIXC
ubiquinone/menaquinone biosynthesis methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AGW42480.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids1_trim150_scaffold_21_85
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95988..97256)
DNA (1269bp) protein (423aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KAS0_9MICO rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
clpX; ATP-dependent protease Clp, ATPase subunit; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX rbh
scnpilot_solids1_trim150_scaffold_21_86
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(97403..98254)
DNA (852bp) protein (284aa)
Aldehyde dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFH3_9MICO rbh
aldehyde dehydrogenase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_87
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98251..99783)
DNA (1533bp) protein (511aa)
Putative aldehyde dehydrogenase AldA {ECO:0000313|EMBL:KJL22716.1}; EC=1.2.1.3 {ECO:0000313|EMBL:KJL22716.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Betaine-aldehyde dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDJ5_9MICO rbh
aldehyde dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_21_88
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99793..100794)
DNA (1002bp) protein (334aa)
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:KJQ54952.1}; EC=4.1.2.4 {ECO:0000313|EMBL:KJQ54952.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Deoxyribose-phosphate aldolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBK0_9MICO rbh
anthranilate synthase component II rbh
Displaying items 61-90 of 199 in total

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