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scnpilot_solids1_trim150_scaffold_21

Search features with annotation key words

Displaying items 121-150 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_21_117
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

131010..132086
DNA (1077bp) protein (359aa)
ubiquinol-cytochrome C reductase n=1 Tax=Microbacterium barkeri RepID=UPI0002F83EFC rbh
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93308.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
qcrA; rieske Fe-S protein; K03890 ubiquinol-cytochrome c reductase iron-sulfur subunit rbh
scnpilot_solids1_trim150_scaffold_21_118
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

132083..133885
DNA (1803bp) protein (601aa)
Menaquinol-cytochrome C reductase cytochrome b subunit n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDN4_9MICO rbh
Menaquinol-cytochrome C reductase cytochrome b subunit {ECO:0000313|EMBL:EQM72981.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
qcrB; cytochrome b subunit of the bc complex; K03891 ubiquinol-cytochrome c reductase cytochrome b subunit rbh
scnpilot_solids1_trim150_scaffold_21_119
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

134041..134457
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D33DB4
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93312.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
rhodanese-related sulfurtransferase
scnpilot_solids1_trim150_scaffold_21_120
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134639..135061)
DNA (423bp) protein (141aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypeptide IV {ECO:0000256|PIRNR:PIRNR017385}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFM2_9MICO
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_121
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135066..136796)
DNA (1731bp) protein (577aa)
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:KJL32636.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KJL32636.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
heme/copper-type cytochrome/quinol oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] rbh
cytochrome C oxidase subunit I n=1 Tax=Microbacterium sp. 292MF RepID=UPI00038216A3 rbh
scnpilot_solids1_trim150_scaffold_21_122
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(136800..137642)
DNA (843bp) protein (281aa)
Cytochrome c oxidase subunit 2 {ECO:0000313|EMBL:KJL22668.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KJL22668.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
heme/copper-type cytochrome/quinol oxidase, subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003492D5D rbh
scnpilot_solids1_trim150_scaffold_21_123
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(137790..138152)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E06217
Iron-sulfur cluster insertion protein ErpA {ECO:0000313|EMBL:KJL32634.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_124
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138262..139677)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003813E90 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT58885.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase rbh
scnpilot_solids1_trim150_scaffold_21_125
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139723..140286
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFM7_9MICO
Membrane protein {ECO:0000313|EMBL:KDA06313.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_126
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(140294..141316)
DNA (1023bp) protein (341aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
pyrD; dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EBC9DA rbh
scnpilot_solids1_trim150_scaffold_21_127
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141339..141803)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBP4_9MICO
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
nrdR; transcriptional regulator; K07738 transcriptional repressor NrdR
scnpilot_solids1_trim150_scaffold_21_128
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141815..143146)
DNA (1332bp) protein (444aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003462C67 rbh
scnpilot_solids1_trim150_scaffold_21_129
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(143151..144770)
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F7EF66
Uncharacterized protein {ECO:0000313|EMBL:KJL22661.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
integral membrane protein
scnpilot_solids1_trim150_scaffold_21_130
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144871..148389)
DNA (3519bp) protein (1173aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
dnaE; DNA polymerase III, alpha subunit; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] rbh
DNA polymerase III subunit alpha n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034922A7 rbh
scnpilot_solids1_trim150_scaffold_21_131
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(148440..149210)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Brevibacterium casei S18 RepID=K9AX39_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL17476.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_132
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149207..149653)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000373F2FD
Uncharacterized protein {ECO:0000313|EMBL:KJL17477.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_133
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149644..150261)
DNA (618bp) protein (206aa)
cholesterol esterase n=1 Tax=Leifsonia sp. 109 RepID=UPI00036E5FBF rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL17478.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_21_134
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

150356..150955
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2F8_LEIAQ
HTH-type transcriptional regulator EthR {ECO:0000313|EMBL:KJL17479.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_21_135
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150960..151898)
DNA (939bp) protein (313aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rlu; pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
RNA pseudouridine synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F1F526 rbh
scnpilot_solids1_trim150_scaffold_21_136
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(151901..152413)
DNA (513bp) protein (171aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBQ1_9MICO
scnpilot_solids1_trim150_scaffold_21_137
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(152481..153071)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EA09BD
Cell wall synthesis protein Wag31 {ECO:0000313|EMBL:KJL22656.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
cell division initiation protein
scnpilot_solids1_trim150_scaffold_21_138
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153220..153516)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003188316
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93325.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
integral membrane protein; K02221 YggT family protein
scnpilot_solids1_trim150_scaffold_21_139
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(153519..153986)
DNA (468bp) protein (156aa)
cell division protein SepF n=1 Tax=Microbacterium barkeri RepID=UPI0002FE2F37
hypothetical protein; K09772 cell division inhibitor SepF
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_140
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(154031..154711)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E62571 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL22653.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein; K06997
scnpilot_solids1_trim150_scaffold_21_141
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(154708..155856)
DNA (1149bp) protein (383aa)
cell division protein FtsZ n=1 Tax=Microbacterium barkeri RepID=UPI000307E8BE rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
ftsZ; cell division GTPase; K03531 cell division protein FtsZ
scnpilot_solids1_trim150_scaffold_21_142
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(156020..156949)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMX7_9MICO rbh
cell division septal protein; K03589 cell division protein FtsQ
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_21_143
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156953..158353)
DNA (1401bp) protein (467aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
murC; UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] rbh
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Microbacterium barkeri RepID=UPI0002E64E30 rbh
scnpilot_solids1_trim150_scaffold_21_144
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158366..159439)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] rbh
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002DB213B rbh
scnpilot_solids1_trim150_scaffold_21_145
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(159436..160650)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000360BB95 rbh
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93331.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
bacterial cell division membrane protein; K03588 cell division protein FtsW rbh
scnpilot_solids1_trim150_scaffold_21_146
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(160619..162157)
DNA (1539bp) protein (513aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EE7047 rbh
Displaying items 121-150 of 199 in total

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