ggKbase home page

SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

SCNPILOT_SOLID_1_TRIM150_Actinobacteria_70_9
In projects: SCNPILOT_SOLID_1_TRIM150

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 201-250 of 417 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids1_trim150_scaffold_4315
Domain: Bacteria (100%)
7 8949 bp 71.18 9.19 92.02
scnpilot_solids1_trim150_scaffold_6525
Species: Micromonospora lupini (50%)
4 3948 bp 72.59 9.19 93.39
scnpilot_solids1_trim150_scaffold_2145
Species: Conexibacter woesei (75%)
8 9398 bp 69.96 9.19 93.85
scnpilot_solids1_trim150_scaffold_4884
Phylum: Actinobacteria (50%)
8 6358 bp 71.39 9.18 91.11
scnpilot_solids1_trim150_scaffold_3582
Domain: Bacteria (58.33%)
12 9771 bp 69.62 9.18 90.27
scnpilot_solids1_trim150_scaffold_17143
Species: Kineococcus radiotolerans (50%)
2 1961 bp 69.76 9.18 83.99
scnpilot_solids1_trim150_scaffold_790
Phylum: Actinobacteria (75%)
16 21513 bp 69.22 9.18 87.27
scnpilot_solids1_trim150_scaffold_1531
Phylum: Actinobacteria (61.54%)
13 12500 bp 71.46 9.18 86.06
scnpilot_solids1_trim150_scaffold_35037
Species: Kutzneria albida (50%)
2 1178 bp 70.88 9.17 54.75
scnpilot_solids1_trim150_scaffold_4552
Domain: Bacteria (75%)
8 11870 bp 74.23 9.16 85.60
scnpilot_solids1_trim150_scaffold_1527
Domain: Bacteria (66.67%)
15 12524 bp 71.12 9.16 87.26
scnpilot_solids1_trim150_scaffold_5517
Class: Actinobacteria (83.33%)
6 4485 bp 65.42 9.16 96.86
scnpilot_solids1_trim150_scaffold_2742
Order: Solirubrobacterales (57.14%)
7 7724 bp 73.99 9.15 90.89
scnpilot_solids1_trim150_scaffold_2510
Class: Actinobacteria (50%)
8 8673 bp 72.03 9.15 88.34
scnpilot_solids1_trim150_scaffold_1404
Class: Actinobacteria (57.14%)
14 18384 bp 74.13 9.15 95.02
scnpilot_solids1_trim150_scaffold_467
Phylum: Actinobacteria (64%)
26 34021 bp 68.81 9.15 91.03
scnpilot_solids1_trim150_scaffold_843
Domain: Bacteria (57.14%)
28 22796 bp 66.11 9.15 81.66
scnpilot_solids1_trim150_scaffold_3858
Species: Conexibacter woesei (75%)
12 10465 bp 68.60 9.14 94.20
scnpilot_solids1_trim150_scaffold_1121
Phylum: Actinobacteria (54.55%)
11 16023 bp 68.97 9.13 92.42
scnpilot_solids1_trim150_scaffold_3311
Species: Conexibacter woesei (80%)
5 6620 bp 68.29 9.13 89.23
scnpilot_solids1_trim150_scaffold_1635
Order: Solirubrobacterales (63.64%)
11 13752 bp 69.52 9.12 89.66
scnpilot_solids1_trim150_scaffold_1514
Order: Solirubrobacterales (53.85%)
13 13780 bp 70.34 9.12 90.30
scnpilot_solids1_trim150_scaffold_5253
Order: Solirubrobacterales (50%)
7 4656 bp 71.95 9.12 91.58
scnpilot_solids1_trim150_scaffold_1574
Phylum: Actinobacteria (50%)
10 12288 bp 71.92 9.11 92.41
scnpilot_solids1_trim150_scaffold_1415
Species: Conexibacter woesei (53.85%)
13 13288 bp 71.34 9.11 94.26
scnpilot_solids1_trim150_scaffold_3581
Genus: Streptomyces (60%)
5 6256 bp 67.93 9.11 88.33
scnpilot_solids1_trim150_scaffold_789
Phylum: Actinobacteria (58.62%)
29 21597 bp 68.42 9.11 77.68
scnpilot_solids1_trim150_scaffold_3425
Species: Conexibacter woesei (57.14%)
7 6457 bp 70.73 9.11 65.09
scnpilot_solids1_trim150_scaffold_1831
Phylum: Actinobacteria (58.33%)
12 10801 bp 70.74 9.10 84.69
scnpilot_solids1_trim150_scaffold_1872
Phylum: Actinobacteria (50%)
10 10565 bp 73.88 9.10 76.21
scnpilot_solids1_trim150_scaffold_2760
Domain: Bacteria (77.78%)
9 7701 bp 70.99 9.10 88.00
scnpilot_solids1_trim150_scaffold_3537 5 6310 bp 72.50 9.10 93.99
scnpilot_solids1_trim150_scaffold_1440
Order: Solirubrobacterales (50%)
15 13938 bp 70.13 9.10 87.11
scnpilot_solids1_trim150_scaffold_15834
Species: Patulibacter medicamentivorans (50%)
2 2078 bp 72.52 9.10 87.78
scnpilot_solids1_trim150_scaffold_2126
Domain: Bacteria (88.89%)
9 9480 bp 71.09 9.10 97.18
scnpilot_solids1_trim150_scaffold_2198
Class: Actinobacteria (66.67%)
9 9171 bp 68.86 9.09 91.49
scnpilot_solids1_trim150_scaffold_1397
Order: Solirubrobacterales (50%)
12 13442 bp 69.77 9.09 90.75
scnpilot_solids1_trim150_scaffold_2301
Phylum: Actinobacteria (50%)
12 16922 bp 73.37 9.08 82.83
scnpilot_solids1_trim150_scaffold_1182
Species: Conexibacter woesei (54.55%)
22 20031 bp 70.77 9.08 92.44
scnpilot_solids1_trim150_scaffold_25763
Species: Conexibacter woesei (50%)
2 1471 bp 67.64 9.08 89.73
scnpilot_solids1_trim150_scaffold_9882
Class: Actinobacteria (66.67%)
3 2912 bp 69.16 9.07 96.33
scnpilot_solids1_trim150_scaffold_2330
Order: Solirubrobacterales (50%)
8 8713 bp 70.13 9.07 91.97
scnpilot_solids1_trim150_scaffold_1076
Species: Conexibacter woesei (50%)
12 21583 bp 70.44 9.06 85.91
scnpilot_solids1_trim150_scaffold_9106
Phylum: Actinobacteria (83.33%)
6 3095 bp 69.63 9.06 83.46
scnpilot_solids1_trim150_scaffold_2004
Species: Conexibacter woesei (63.64%)
12 9901 bp 71.72 9.06 90.83
scnpilot_solids1_trim150_scaffold_1047
Phylum: Actinobacteria (52.94%)
18 16991 bp 71.20 9.05 90.52
scnpilot_solids1_trim150_scaffold_3132
Species: Conexibacter woesei (66.67%)
9 6941 bp 68.42 9.05 91.63
scnpilot_solids1_trim150_scaffold_2406
Phylum: Actinobacteria (61.11%)
18 13207 bp 70.55 9.05 85.77
scnpilot_solids1_trim150_scaffold_3695
Species: Conexibacter woesei (66.67%)
6 6086 bp 69.04 9.05 98.09
scnpilot_solids1_trim150_scaffold_3736
Phylum: Actinobacteria (57.14%)
7 6020 bp 72.76 9.04 93.99
Displaying items 201-250 of 417 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.