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scnpilot_solids1_trim150_scaffold_236

Search features with annotation key words

Displaying items 31-60 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_236_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36543..39323
DNA (2781bp) protein (927aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D5968
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEV98464.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_236_31
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39337..40056
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AF4D7
Uncharacterized protein {ECO:0000313|EMBL:GAO45348.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_236_32
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40099..41667)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E22A rbh
ABC transporter permease {ECO:0000313|EMBL:KIA96375.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
glycine/betaine ABC transporter periplasmic protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_236_33
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41667..42635)
DNA (969bp) protein (323aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y252_9SPHI rbh
ABC transporter related protein {ECO:0000313|EMBL:EHQ26709.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ABC transporter; K05847 osmoprotectant transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_236_34
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42820..43818)
DNA (999bp) protein (333aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG2_NIAKG
FKBP-type peptidylprolyl isomerase
scnpilot_solids1_trim150_scaffold_236_35
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43841..44848)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370D2E0
Exopolyphosphatase {ECO:0000313|EMBL:KIC91900.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein
scnpilot_solids1_trim150_scaffold_236_36
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44956..46920)
DNA (1965bp) protein (655aa)
aminopeptidase (EC:3.4.11.-)
Aminopeptidase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S425_9FLAO
Peptidase M1 {ECO:0000313|EMBL:KGD67495.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
scnpilot_solids1_trim150_scaffold_236_37
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(46944..47306)
DNA (363bp) protein (121aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI79_CHIPD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_236_38
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47319..48305)
DNA (987bp) protein (329aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000313|EMBL:AEV97289.1}; EC=1.8.1.9 {ECO:0000313|EMBL:AEV97289.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Thioredoxin reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE98_NIAKG
scnpilot_solids1_trim150_scaffold_236_39
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48773..49303)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45561.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_236_40
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49435..50094)
DNA (660bp) protein (220aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ0_NIAKG
Putative outer membrane lipoprotein carrier protein {ECO:0000313|EMBL:GAO45558.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane lipoprotein carrier protein LolA
scnpilot_solids1_trim150_scaffold_236_41
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50370..51665
DNA (1296bp) protein (432aa)
L-sorbosone dehydrogenase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5V4_PEDSD
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ADY51025.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_236_42
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

51669..52118
DNA (450bp) protein (150aa)
Cytochrome c class I n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAL7_9SPHI
Cytochrome c class I {ECO:0000313|EMBL:EHQ29137.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
cytochrome C class I
scnpilot_solids1_trim150_scaffold_236_43
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52193..53833)
DNA (1641bp) protein (547aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
CTP synthase; K01937 CTP synthase [EC:6.3.4.2]
CTP synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00036F7E36
scnpilot_solids1_trim150_scaffold_236_44
unknown

Not on your lists

53887..54057
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_236_45
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54030..55013)
DNA (984bp) protein (328aa)
ADP-glyceromanno-heptose 6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP2_NIAKG
scnpilot_solids1_trim150_scaffold_236_46
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55006..57210)
DNA (2205bp) protein (735aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; S
phosphoribosylformylglycinamidine synthase subunit II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NK44_9SPHI
scnpilot_solids1_trim150_scaffold_236_47
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

57311..58399
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D8EEB
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids1_trim150_scaffold_236_48
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58604..60796
DNA (2193bp) protein (731aa)
Glutamate--ammonia ligase {ECO:0000313|EMBL:AEW00974.1}; EC=6.3.1.2 {ECO:0000313|EMBL:AEW00974.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
glutamate--ammonia ligase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamate--ammonia ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP8_NIAKG
scnpilot_solids1_trim150_scaffold_236_49
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

61024..61503
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=3566497 bin=GWF2_Planctomycetes_50_10 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=GWF2_Planctomycetes_50_10_curated
scnpilot_solids1_trim150_scaffold_236_50
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61800..62348)
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO44471.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_236_51
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62338..63384)
DNA (1047bp) protein (349aa)
arginase/agmatinase/formiminoglutamase; K01480 agmatinase [EC:3.5.3.11]
Arginase/agmatinase/formiminoglutamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPA9_CHIPD
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:ACU60545.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_236_52
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63525..64043
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM
scnpilot_solids1_trim150_scaffold_236_53
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

64111..66213
DNA (2103bp) protein (701aa)
Glycoside hydrolase 97 n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZY37_ORNRL rbh
glycoside hydrolase rbh
Alpha-glucosidase {ECO:0000313|EMBL:KIA83104.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
scnpilot_solids1_trim150_scaffold_236_54
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66556..66948)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000371BC73
Uncharacterized protein {ECO:0000313|EMBL:CCX42981.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hiran domain superfamily
scnpilot_solids1_trim150_scaffold_236_55
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66920..67741)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003635DA3
Uncharacterized protein {ECO:0000313|EMBL:CCX42980.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
scnpilot_solids1_trim150_scaffold_236_56
unknown

Not on your lists

comp(67864..67992)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_236_57
unknown

Not on your lists

68036..68152
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_236_trna_1
unknown

Not on your lists

comp(68425..68497)
DNA (73bp)
transferRNA Arg
scnpilot_solids1_trim150_scaffold_236_58
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68784..69497)
DNA (714bp) protein (238aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG
Displaying items 31-60 of 68 in total

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