ggKbase home page

scnpilot_solids1_trim150_scaffold_236_52

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 63525..64043

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 168.0
  • Bit_score: 178
  • Evalue 5.90e-42
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 171.0
  • Bit_score: 189
  • Evalue 4.70e-45
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 169.0
  • Bit_score: 177
  • Evalue 4.10e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 519
ATGGAGTATTTCAAAATCGGCAAACTGGCAGCCTCTCACGGATTTGAAGGTGAAATGATTTTAAAACATTCCCTCGGCAAAAAATGCACTTTTGAAAAAGGCGCTCCCGTTTTTCTTGAGGATAAAAAAAATTCATTTATTCCCTGGTTTATTGTACGCTCAAAAGCAAAGAACGAAGAAGAATCTTTCATTTTGCTCGAGGGAATTGATTCAAAAGAAAAAGCTGCAAAATACCTGAAAAAAGAAGTCTGGTTAAGCGAAGATGATTTTCACCGGCTCGCCTCACCACAGACAGCTATTTCATTACTGGGTTTTCAAATCGTTCAAAAGGAAAAAATTATCGGAGAAATTGAAGAAGTCATAGAGCAGCCGCATCAGGTACTTTGCAAAATTACCATTGATAAAAAAGAAGCGTGGATTCCCCTTCACGAAGCTTTTTTAAAAAAAGTGGACAAAAAGAAAAAAATTATTTACGTGGAATTACCGGAAGGCCTGCTGGATATTTATAAAAACGCCTGA
PROTEIN sequence
Length: 173
MEYFKIGKLAASHGFEGEMILKHSLGKKCTFEKGAPVFLEDKKNSFIPWFIVRSKAKNEEESFILLEGIDSKEKAAKYLKKEVWLSEDDFHRLASPQTAISLLGFQIVQKEKIIGEIEEVIEQPHQVLCKITIDKKEAWIPLHEAFLKKVDKKKKIIYVELPEGLLDIYKNA*