ggKbase home page

scnpilot_solids1_trim150_scaffold_2148

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2148_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1077)
DNA (1077bp) protein (359aa)
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J350_9PROT
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
scnpilot_solids1_trim150_scaffold_2148_2
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1143..1949
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037CD128
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress {ECO:0000313|EMBL:BAQ16523.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
glycine cleavage system protein T; K06980
scnpilot_solids1_trim150_scaffold_2148_3
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2013..2558
DNA (546bp) protein (182aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJ44_MYXSD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AGC48991.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
scnpilot_solids1_trim150_scaffold_2148_4
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2584..3201
DNA (618bp) protein (206aa)
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR37_PARL1
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:GAK46819.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids1_trim150_scaffold_2148_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3183..3656)
DNA (474bp) protein (158aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; EC=1.7.1.13 {ECO:0000255|HAMAP-Rule:MF_00818};; 7-cyano-7-carbaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000255|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000255|HAMAP-Rule:MF_00818}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 139
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=QUEF_PARL1
scnpilot_solids1_trim150_scaffold_2148_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3658..4014)
DNA (357bp) protein (119aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT49_9BRAD
scnpilot_solids1_trim150_scaffold_2148_7
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4228..4548
DNA (321bp) protein (107aa)
Small multidrug resistance protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZX5_9GAMM
Multidrug transporter {ECO:0000313|EMBL:KGO99022.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
putative multidrug resistance protein/chaperone; K11741 quaternary ammonium compound-resistance protein SugE
scnpilot_solids1_trim150_scaffold_2148_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4562..5110)
DNA (549bp) protein (183aa)
peroxiredoxin n=1 Tax=Nevskia ramosa RepID=UPI0003B4576C
Peroxiredoxin {ECO:0000313|EMBL:KGI77367.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
antioxidant, AhpC/TSA family protein
scnpilot_solids1_trim150_scaffold_2148_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5405..5962
DNA (558bp) protein (186aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=ATPD_PARL1
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
scnpilot_solids1_trim150_scaffold_2148_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5976..7508
DNA (1533bp) protein (511aa)
atpA; ATP synthase F0F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
ATP synthase subunit alpha n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPA_PHEZH rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids1_trim150_scaffold_2148_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7525..8394
DNA (870bp) protein (290aa)
atpG; ATP synthase F0F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
ATP synthase gamma chain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPG_PHEZH rbh
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_2148_12
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8414..9379
DNA (966bp) protein (322aa)
ATP synthase F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
ATP synthase subunit beta n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VH99_CAUST
Displaying 12 items

View Taxonomy