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scnpilot_solids1_trim150_scaffold_2163

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2163_trna_1
unknown

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1..73
DNA (73bp)
transferRNA Trp
scnpilot_solids1_trim150_scaffold_2163_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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116..376
DNA (261bp) protein (87aa)
Protein translocase subunit SecE n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3X7_9RHIZ
protein translocation preprotein SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids1_trim150_scaffold_2163_2
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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393..965
DNA (573bp) protein (191aa)
Transcription termination/antitermination protein NusG n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SU84_9BRAD
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
scnpilot_solids1_trim150_scaffold_2163_3
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1029..1457
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=2 Tax=Bradyrhizobium RepID=RL11_BRASB
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
scnpilot_solids1_trim150_scaffold_2163_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1460..2167
DNA (708bp) protein (236aa)
50S ribosomal protein L1 n=1 Tax=Nitratireductor indicus C115 RepID=K2NQ63_9RHIZ
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_solids1_trim150_scaffold_2163_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2446..2961
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Nitratireductor indicus C115 RepID=K2MXM1_9RHIZ
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids1_trim150_scaffold_2163_6
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3008..3385
DNA (378bp) protein (126aa)
50S ribosomal protein L7 n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237EA2B
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
50S ribosomal protein L7/L12
scnpilot_solids1_trim150_scaffold_2163_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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3566..7648
DNA (4083bp) protein (1361aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A943_STAND
scnpilot_solids1_trim150_scaffold_2163_8
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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7763..9301
DNA (1539bp) protein (513aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RPOC_PARL1
Displaying 9 items

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