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scnpilot_solids1_trim150_scaffold_2350

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2350_1
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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272..577
DNA (306bp) protein (102aa)
transposase IS66 n=1 Tax=Bradyrhizobium elkanii RepID=UPI000363BA12
Hypothetical 61.7 kDa protein y4HP {ECO:0000313|EMBL:GAJ37423.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
IS66 family insertion sequence transposase protein
scnpilot_solids1_trim150_scaffold_2350_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1059..1484)
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39EX9_BURS3
Glyoxalase {ECO:0000313|EMBL:ETR75152.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
scnpilot_solids1_trim150_scaffold_2350_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1891..2238)
DNA (348bp) protein (116aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAK3_9BRAD
alkylhydroperoxidase
scnpilot_solids1_trim150_scaffold_2350_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2432..3493
DNA (1062bp) protein (354aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ10_PARL1 rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS61993.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2350_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3632..4888
DNA (1257bp) protein (419aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK2_PARL1
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ABS64285.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2350_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4994..6826
DNA (1833bp) protein (611aa)
Putative monooxygenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCQ6_PHEZH rbh
monooxygenase rbh
Putative monooxygenase {ECO:0000313|EMBL:ACG78243.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_2350_7
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6847..7395)
DNA (549bp) protein (183aa)
Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFM9_MESOW
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEH85774.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids1_trim150_scaffold_2350_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7818..8642)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ74_PARL1
Putative tetratricopeptide repeat family protein {ECO:0000313|EMBL:CDO60150.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2350_9
unknown

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comp(8585..9736)
DNA (1152bp) protein (384aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2350_10
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(9736..11223)
DNA (1488bp) protein (496aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCZ0_9CYAN rbh
membrane bound O-acyl transferase MBOAT family protein rbh
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:AGY56713.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
scnpilot_solids1_trim150_scaffold_2350_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11291..11938)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIA4_AZOL4
Lipoprotein {ECO:0000313|EMBL:KJR62361.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2350_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11935..12825)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APJ5_AZOBR
conserved protein of unknown function; mammalian cell entry related domain
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIB13897.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
scnpilot_solids1_trim150_scaffold_2350_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12837..13622)
DNA (786bp) protein (262aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APJ4_AZOBR rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY41106.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative ABC transporter, ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_2350_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13619..14758)
DNA (1140bp) protein (380aa)
ABC transporter, permease protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT89_RHOCS rbh
ABC transporter permease; K02066 putative ABC transport system permease protein rbh
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACI98847.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
scnpilot_solids1_trim150_scaffold_2350_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14930..15418
DNA (489bp) protein (163aa)
Putative short-chain dehydrogenase/reductase SDR family protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELQ4_BRASB
short-chain dehydrogenase/reductase SDR family protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Displaying 15 items

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