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scnpilot_solids1_trim150_scaffold_2459

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2459_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(287..1276)
DNA (990bp) protein (330aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase NPD n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VM83_CAUST
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADG11606.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
scnpilot_solids1_trim150_scaffold_2459_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1273..1911)
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG43_PHEZH
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACG77167.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_2459_3
uncultured Rhizobiales bacterium HF4000_48A13, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1979..3586)
DNA (1608bp) protein (536aa)
acyl-CoA synthetase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=uncultured Rhizobiales bacterium HF4000_48A13 RepID=E0XZ37_9RHIZ rbh
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:ADI19678.1}; TaxID=710781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; environmental samples.;" source="uncultured Rhizobiales bacterium HF4000_48A13.;"
scnpilot_solids1_trim150_scaffold_2459_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3598..4359)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ9_PARL1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS62182.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2459_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4397..5209)
DNA (813bp) protein (271aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTS1_PARL1 rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABS63304.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2459_6
unknown

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comp(5288..5383)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2459_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5504..5683)
DNA (180bp) protein (60aa)
membrane protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248853D
transmembrane protein
UPF0391 membrane protein PHZ_c0725 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_2459_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5853..8087
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDC7_PHEZH rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids1_trim150_scaffold_2459_9
bacterium YEK0313, Bacteria

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8108..8362
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003756024
putative major facilitator superfamily transporter
Inner membrane metabolite transport protein YgcS {ECO:0000313|EMBL:CEJ11630.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 9 items

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