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scnpilot_solids1_trim150_scaffold_2613

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2613_1
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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1..153
DNA (153bp) protein (51aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFT3_PHEZH
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAK45207.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids1_trim150_scaffold_2613_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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233..1363
DNA (1131bp) protein (377aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS00_PARL1 rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS62683.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2613_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1444..2865)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRP2_9BRAD
putative sensor histidine kinase, membrane protein
scnpilot_solids1_trim150_scaffold_2613_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3090..3887
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS02_PARL1 rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABS62685.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2613_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3965..4255
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002D2BB1F
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids1_trim150_scaffold_2613_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4252..4971)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRC1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30040.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2613_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4984..6564)
DNA (1581bp) protein (527aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
D-3-phosphoglycerate dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAT3_PHEZH rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ACG79681.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_2613_8
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6724..7881)
DNA (1158bp) protein (386aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
phosphoserine aminotransferase; K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV18_PARL1
Displaying 8 items

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