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scnpilot_solids1_trim150_scaffold_2628

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2628_1
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
elongation factor Tu n=1 Tax=Gluconobacter frateurii RepID=UPI00029A20F7
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
scnpilot_solids1_trim150_scaffold_2628_2
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(152..2227)
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S6L5_PHAFV rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
elongation factor G; K02355 elongation factor G rbh
scnpilot_solids1_trim150_scaffold_2628_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2248..2718)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS7_PARL1
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2628_4
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2735..3112)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=1 Tax=Woodsholea maritima RepID=UPI00035E2F2D
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
scnpilot_solids1_trim150_scaffold_2628_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3386..3799)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H2F7_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ73697.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids1_trim150_scaffold_2628_6
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3919..4653)
DNA (735bp) protein (245aa)
TonB family C-terminal domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W7I2_9CAUL
TonB protein; K03832 periplasmic protein TonB
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
scnpilot_solids1_trim150_scaffold_2628_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4650..5810)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH77_AZOL4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBS90786.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
scnpilot_solids1_trim150_scaffold_2628_8
Asaia platycodi, Asaia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5812..6492)
DNA (681bp) protein (227aa)
PKHD-type hydroxylase ASAP_3118 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1382230 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Asaia.;" source="Asaia platycodi SF2.1.;"
Fe(II)-dependent oxygenase n=1 Tax=Asaia sp. SF2.1 RepID=V8A3V8_9PROT rbh
hydroxylase rbh
scnpilot_solids1_trim150_scaffold_2628_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6504..7946)
DNA (1443bp) protein (481aa)
TonB-dependent siderophore receptor n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3A9_STAND
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ADH89668.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Displaying 9 items

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