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scnpilot_solids1_trim150_scaffold_2998

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2998_1
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..420
DNA (420bp) protein (140aa)
Heme exporter protein C n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4N9K6_9CAUL
Heme exporter protein C {ECO:0000313|EMBL:ESQ78557.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
heme exporter protein CcmC; K02195 heme exporter protein C
scnpilot_solids1_trim150_scaffold_2998_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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569..1138
DNA (570bp) protein (190aa)
Thiol-disulfide oxidoreductase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHT3_9RHOB
Thiol-disulfide oxidoreductase {ECO:0000313|EMBL:EJW13591.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
periplasmic protein thiol--disulfide oxidoreductase DsbE; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
scnpilot_solids1_trim150_scaffold_2998_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1513..2028)
DNA (516bp) protein (172aa)
Transcriptional regulator, MarR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSZ6_PARL1
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABS63029.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2998_4
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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2292..2861
DNA (570bp) protein (190aa)
NUDIX hydrolase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B44CDF
NUDIX hydrolase {ECO:0000313|EMBL:GAK44257.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
NUDIX hydrolase
scnpilot_solids1_trim150_scaffold_2998_5
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2916..3494)
DNA (579bp) protein (193aa)
septation protein A n=1 Tax=Brucella melitensis RepID=UPI0002F34BF7
intracellular septation protein A; K06190 intracellular septation protein
Probable intracellular septation protein A {ECO:0000255|HAMAP-Rule:MF_00189}; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).;"
scnpilot_solids1_trim150_scaffold_2998_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3501..4451)
DNA (951bp) protein (317aa)
cell division protein FtsY n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000377B8BB
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids1_trim150_scaffold_2998_7
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4448..5695)
DNA (1248bp) protein (416aa)
2-methylthioadenine synthase n=2 Tax=Labrenzia RepID=U7FN94_9RHOB
2-methylthioadenine synthase {ECO:0000313|EMBL:ERP87475.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
MiaB family RNA modification protein
scnpilot_solids1_trim150_scaffold_2998_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5692..6525)
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Diaminopimelate epimerase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHV6_AZOBR rbh
dapF; diaminopimelate epimerase rbh
scnpilot_solids1_trim150_scaffold_2998_9
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6617..7213
DNA (597bp) protein (199aa)
prolyl oligopeptidase; K01322 prolyl oligopeptidase [EC:3.4.21.26]
prolyl oligopeptidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000364DE3E
Prolyl oligopeptidase {ECO:0000313|EMBL:KDN19914.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
Displaying 9 items

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