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scnpilot_solids1_trim150_scaffold_4719

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4719_1

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comp(3..407)
DNA (405bp) protein (135aa)
Oligopeptide transport system permease protein oppB n=1 Tax=uncultured bacterium BLR7 RepID=C0INR0_9BACT
Oligopeptide transport system permease protein oppB {ECO:0000313|EMBL:ACN58946.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_4719_2

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comp(409..1344)
DNA (936bp) protein (312aa)
ABC-type dipeptide/oligopeptide/nickel transport system n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ9_9BACT rbh
ABC-type dipeptide/oligopeptide/nickel transport system {ECO:0000313|EMBL:ACN58945.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
dipeptide/oligopeptide/nickel ABC transporter permease; K15582 oligopeptide transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_4719_3

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comp(1344..2264)
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ8_9BACT rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACN58944.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
oppB; oligopeptide transport system permease OppB; K02033 peptide/nickel transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_4719_4

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comp(2210..3640)
DNA (1431bp) protein (477aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ7_9BACT rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ACN58943.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
polyamine/opine ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_4719_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3637..5478)
DNA (1842bp) protein (614aa)
AsmA family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ2_PARL1
AsmA family protein; K07289 AsmA protein
AsmA family protein {ECO:0000313|EMBL:ABS62175.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_4719_6
unknown

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comp(5475..5696)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4719_trna_1
unknown

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5580..5653
DNA (74bp)
transferRNA His
scnpilot_solids1_trim150_scaffold_4719_7

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5886..6632
DNA (747bp) protein (249aa)
Nitroreductase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXI5_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN99089.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase family protein rbh
scnpilot_solids1_trim150_scaffold_4719_8
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6655..7110)
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9Z7_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KCZ57432.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
transcriptional regulator, AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
scnpilot_solids1_trim150_scaffold_4719_9
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7107..7580)
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWD4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ57433.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
AsnC family transcriptional regulator
Displaying 10 items

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