ggKbase home page

scnpilot_solids1_trim150_scaffold_3040

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3040_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..471
DNA (471bp) protein (157aa)
GTPase Era n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX49_PARL1
GTP-binding protein Era; K03595 GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3040_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

477..1220
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI0003753AA6
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
scnpilot_solids1_trim150_scaffold_3040_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1229..3481
DNA (2253bp) protein (751aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003750EB9
scnpilot_solids1_trim150_scaffold_3040_4
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3578..5242)
DNA (1665bp) protein (555aa)
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1R7_9SPHN rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIG13954.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Acyl-CoA dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_3040_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5345..6688
DNA (1344bp) protein (448aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP35_PARL1 rbh
major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS61668.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3040_6
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6667..7104)
DNA (438bp) protein (146aa)
yjfH; RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
UPI0003D60151 related cluster n=1 Tax=unknown RepID=UPI0003D60151
RNA methyltransferase {ECO:0000313|EMBL:ETI64444.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
Displaying 6 items

View Taxonomy