ggKbase home page

scnpilot_solids1_trim150_scaffold_3113

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3113_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..960)
DNA (960bp) protein (320aa)
Serine/threonine dehydratase {ECO:0000313|EMBL:KJB97083.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KJB97083.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
threo-3-hydroxyaspartate ammonia-lyase (EC:4.3.1.16); K01754 threonine dehydratase [EC:4.3.1.19]
Serine/threonine dehydratase n=2 Tax=Oligotropha carboxidovorans RepID=B6JBD8_OLICO
scnpilot_solids1_trim150_scaffold_3113_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

988..1905
DNA (918bp) protein (306aa)
zinc transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B3E935
Zinc transporter {ECO:0000313|EMBL:AIB13128.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
znuA; ABC transporter substrate binding protein (zinc); K09815 zinc transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_3113_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1985..2959
DNA (975bp) protein (325aa)
UPI0003CFC099 related cluster n=1 Tax=unknown RepID=UPI0003CFC099 rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
corA; Mg2 transporter protein CorA family protein rbh
scnpilot_solids1_trim150_scaffold_3113_4
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2965..3372)
DNA (408bp) protein (136aa)
GCN5-related N-acetyltransferase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QXW3_PIRSD
N-acetyltransferase GCN5
Tax=CG_Syntroph_01
scnpilot_solids1_trim150_scaffold_3113_5
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3395..4402)
DNA (1008bp) protein (336aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase domain-containing protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30WV9_DESDG
D-alanine--D-alanine ligase domain-containing protein {ECO:0000313|EMBL:ABB39837.1}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
scnpilot_solids1_trim150_scaffold_3113_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4404..5405)
DNA (1002bp) protein (334aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase id=4879769 bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
scnpilot_solids1_trim150_scaffold_3113_7
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5439..6749)
DNA (1311bp) protein (437aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037D203C rbh
Tax=RBG_16_Alphaproteobacteria_64_48_curated
Displaying 7 items

View Taxonomy