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scnpilot_solids1_trim150_scaffold_3224

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3224_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..235
DNA (234bp) protein (78aa)
DNA glycosylase; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosylase II n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RFJ4_9RHIZ
Strain MEJ076 contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98175.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
scnpilot_solids1_trim150_scaffold_3224_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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235..927
DNA (693bp) protein (231aa)
Phospholipase/Carboxylesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTL8_PARL1
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABS63251.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3224_3
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1187..1513
DNA (327bp) protein (109aa)
HNH endonuclease n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F3I6_9RHIZ
HNH endonuclease {ECO:0000313|EMBL:EHS52709.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
endonuclease
scnpilot_solids1_trim150_scaffold_3224_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1486..2154)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000369D458
Uncharacterized protein {ECO:0000313|EMBL:KJC60059.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
N-acetyltransferase GCN5
scnpilot_solids1_trim150_scaffold_3224_5
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2184..2801)
DNA (618bp) protein (206aa)
Ubiquinone biosynthesis protein COQ7; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
Ubiquinone biosynthesis protein COQ7 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKN8_RHOPH
scnpilot_solids1_trim150_scaffold_3224_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2798..3286)
DNA (489bp) protein (163aa)
disulfide bond formation protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B44C31
disulfide bond formation protein DsbB-like protein
Disulfide bond formation protein DsbB-like protein {ECO:0000313|EMBL:ABQ68907.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids1_trim150_scaffold_3224_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3763..4590
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP00_PARL1
hypothetical protein; K07043
Uncharacterized protein {ECO:0000313|EMBL:ABS61633.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3224_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4610..6652)
DNA (2043bp) protein (681aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABS61631.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABS61631.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Penicillin-binding protein, 1A family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ8_PARL1
1A family penicillin-binding protein
scnpilot_solids1_trim150_scaffold_3224_9
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6743..7876)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IW08_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00482.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Displaying 9 items

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