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scnpilot_solids1_trim150_scaffold_3382

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3382_1
unknown

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comp(3..137)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3382_2
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(316..831)
DNA (516bp) protein (172aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UGU1_9RHOB
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EAP90012.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
scnpilot_solids1_trim150_scaffold_3382_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(985..2322)
DNA (1338bp) protein (446aa)
Protein TolB n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=TOLB_PARL1
beta-propeller repeat-containing to-pal system protein TolB; K03641 TolB protein
Protein TolB {ECO:0000255|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3382_4
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2334..3236)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039E0252
Conserved protein {ECO:0000313|EMBL:GAK46559.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3382_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3202..3639)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036E9761
tolR; biopolymer transporter; K03560 biopolymer transport protein TolR
Biopolymer transport TolR {ECO:0000313|EMBL:GAK46560.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids1_trim150_scaffold_3382_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3639..4532)
DNA (894bp) protein (298aa)
Protein TolQ n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A786_STAND
protein TolQ; K03562 biopolymer transport protein TolQ
Protein TolQ {ECO:0000313|EMBL:ADH90317.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids1_trim150_scaffold_3382_7
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4881..5339)
DNA (459bp) protein (153aa)
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMK2_BRESC
4-hydroxybenzoyl-CoA thioesterase family active site {ECO:0000313|EMBL:GAM96452.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
scnpilot_solids1_trim150_scaffold_3382_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5326..6384)
DNA (1059bp) protein (353aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXE6_9PROT
scnpilot_solids1_trim150_scaffold_3382_9
unknown

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comp(6393..6506)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 9 items

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