ggKbase home page

scnpilot_solids1_trim150_scaffold_3749

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3749_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38..1921
DNA (1884bp) protein (628aa)
ABC transporter ATPase (EC:3.6.3.-); K06158 ATP-binding cassette, subfamily F, member 3
Putative ABC transporter putative ATPase, duplicated ATPase domains {ECO:0000313|EMBL:CCB67344.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCB67344.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative ABC transporter putative ATPase, duplicated ATPase domains n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC74_HYPSM
scnpilot_solids1_trim150_scaffold_3749_2
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1946..2692)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B478F6
Membrane protein {ECO:0000313|EMBL:KGR58896.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3749_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2751..3209)
DNA (459bp) protein (153aa)
DNA polymerase III chi subunit HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III chi subunit HolC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYF7_PARL1
DNA polymerase III chi subunit HolC {ECO:0000313|EMBL:ABS64940.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3749_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3211..4740)
DNA (1530bp) protein (510aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYF8_PARL1
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
scnpilot_solids1_trim150_scaffold_3749_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4893..6002
DNA (1110bp) protein (370aa)
Permease YjgP/YjgQ family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYF9_PARL1
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CDO60885.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
YjgP/YjgQ family permease; K07091 lipopolysaccharide export system permease protein
Displaying 5 items

View Taxonomy