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scnpilot_solids1_trim150_scaffold_1413

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1413_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..844
DNA (843bp) protein (281aa)
Putative O-acetyl transferase {ECO:0000313|EMBL:CCM78252.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCM78252.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000365FB51
acyltransferase 3
scnpilot_solids1_trim150_scaffold_1413_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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973..1338
DNA (366bp) protein (122aa)
Rrf2 family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI000364544F
Uncharacterized protein {ECO:0000313|EMBL:EJZ34884.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_1413_3
unknown

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1328..2029
DNA (702bp) protein (234aa)
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] rbh
Methyltransferase type 12 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRQ9_PARL1 rbh
Methyltransferase type 12 {ECO:0000313|EMBL:CPR22503.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
scnpilot_solids1_trim150_scaffold_1413_4
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2108..3064
DNA (957bp) protein (319aa)
ISSpo8, transposase n=1 Tax=Citreicella sp. SE45 RepID=D0CZD6_9RHOB rbh
ISSpo8, transposase {ECO:0000313|EMBL:EEX16967.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1413_5

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3103..3906
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1A3P2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD51503.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1413_6
unknown

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comp(4097..4348)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1413_7
unknown

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comp(4734..4964)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1413_8
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5190..5666
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ANG1_MARMM
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
scnpilot_solids1_trim150_scaffold_1413_9
unknown

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5688..6314
DNA (627bp) protein (209aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1413_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6450..9170
DNA (2721bp) protein (907aa)
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
DNA gyrase subunit A n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CA909
scnpilot_solids1_trim150_scaffold_1413_11
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9170..9718
DNA (549bp) protein (183aa)
coaD; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 /
Phosphopantetheine adenylyltransferase n=7 Tax=Rhodobacter capsulatus RepID=D5ATM3_RHOCB
scnpilot_solids1_trim150_scaffold_1413_12
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9720..10205
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHY5_MOBAS
ppiB; peptidyl prolyl cis-trans isomerase (rotamase B)
scnpilot_solids1_trim150_scaffold_1413_13
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10298..11422
DNA (1125bp) protein (375aa)
Putative aminotransferase DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ93_PHAMO rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EPY01736.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
aminotransferase
scnpilot_solids1_trim150_scaffold_1413_14
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11444..12499
DNA (1056bp) protein (352aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IE73_METNO
scnpilot_solids1_trim150_scaffold_1413_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12496..13299
DNA (804bp) protein (268aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase id=2514102 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying 15 items

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