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scnpilot_solids1_trim150_scaffold_1936

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1936_1

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comp(1..543)
DNA (543bp) protein (181aa)
(Uracil-5)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P8S8_9CAUL
(Uracil-5)-methyltransferase {ECO:0000313|EMBL:AHN97600.1}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
scnpilot_solids1_trim150_scaffold_1936_2

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comp(572..2497)
DNA (1926bp) protein (642aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR71_PARL1 rbh
scnpilot_solids1_trim150_scaffold_1936_3

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comp(2744..3004)
DNA (261bp) protein (87aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease VII small subunit n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGK2_9RHIZ
scnpilot_solids1_trim150_scaffold_1936_4
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3007..3954)
DNA (948bp) protein (316aa)
Acetylspermidine deacetylase {ECO:0000313|EMBL:ESR24751.1}; EC=3.5.1.48 {ECO:0000313|EMBL:ESR24751.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
acetoin utilization protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B451FC
putative deacetylase
scnpilot_solids1_trim150_scaffold_1936_5
unknown

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comp(3951..4310)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1936_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4632..7778
DNA (3147bp) protein (1049aa)
TonB-dependent receptor, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXP2_RHOCS rbh
TonB-dependent receptor rbh
TonB-dependent receptor, putative {ECO:0000313|EMBL:ACJ01066.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
scnpilot_solids1_trim150_scaffold_1936_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7976..9607
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6B842 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids1_trim150_scaffold_1936_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9592..10182)
DNA (591bp) protein (197aa)
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHV1_PHEZH
aspartyl/asparaginyl beta-hydroxylase
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:ACG79142.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying 8 items

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